PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0429s0200.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 607aa    MW: 65518.7 Da    PI: 7.3975
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0429s0200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.5e-31343401259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  SapurV1A.0429s0200.1.p 343 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTILITTYEGNHNHP 401
                             7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-33327403IPR003657WRKY domain
SuperFamilySSF1182909.42E-28335403IPR003657WRKY domain
PROSITE profilePS5081129.723337403IPR003657WRKY domain
SMARTSM007747.7E-37342402IPR003657WRKY domain
PfamPF031061.7E-26344401IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MDKGWGLTLA SDPVSVFSSN NNSSSNNSSP VSSFLKIKRD FSSDHNMADS RNVHNSMFQF  60
PVSLSAGKEE VSAAASREVD FFKEKINRVD GHDSKTTTVI VKKENSLAEA APRSRAALDV  120
NTGLHLLTAN ARSDQSTVDD GVSCEVDDKR SKNVELAQLQ VELQKMNSEN QRLKDMLSQV  180
TNNYSALQMH FVALMQQRNH GVESNKDQET VTAKSSEEKK HEMVPRQFMD LGPSAETDEI  240
SNSSSEERTR SITPQNHFEV ASTKNNGKLE AVPYDQENSS LRDGKRIGGD ESPESESQGW  300
NPIKVQKLNP ASSANKAIEQ SAEATMRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP  360
CPRAYYRCTM AVGCPVRKQV QRCAEDKTIL ITTYEGNHNH PLPPAAMTMA STTTAAATML  420
LSGSMSSADG MMNPNLLARA ILPGCSSSMA TISASAPFPT VTLDLTNNTN PLQFQRPPAQ  480
FQVPFPGQPQ NFALVTAPQL PQGFGQALYN QSKFSGLQLS QDHMGSSQLG HQAQSQLLHS  540
GQQPSLSHDT LSAATAAITS DPNFTAALAA AISSIIGGAN ANITTTTNNN NNSNSNINAT  600
NTSNRN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-23329405176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0429s0200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774480.0GQ377448.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 28 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024455846.10.0probable WRKY transcription factor 31
SwissprotQ9XEC31e-160WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2K2AN650.0A0A2K2AN65_POPTR; Uncharacterized protein
STRINGPOPTR_0004s00890.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86634121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-140WRKY family protein