PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0423s0140.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 203aa MW: 22279.7 Da PI: 7.5988 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 37.4 | 7.6e-12 | 2 | 58 | 75 | 128 |
NAM 75 nratksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 +r +k gyW+ +gk ++v++ +++++g+++ +vfy+g +a+++++t Wv+ ey+l SapurV1A.0423s0140.2.p 2 RREAKGGYWRRSGKVRDVVVGpgGKAVMGTRTRFVFYSGnSAKSAVRTGWVLYEYAL 58 68899**************99878888**********986788899*********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.323 | 1 | 74 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.88E-16 | 2 | 74 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.8E-6 | 3 | 58 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MRREAKGGYW RRSGKVRDVV VGPGGKAVMG TRTRFVFYSG NSAKSAVRTG WVLYEYALVD 60 HAKASFVLCR VFVKSRGGNS ISENVVSSCA EESVSAVRTN GAHHDGFLTP DIAEAKVHDD 120 HVNMQNDLSR YSARLGRDFD DQVTTRPTSI SSFQFPSNSQ CNEVVRRTSG PTDGNMHVDA 180 ETAQQLRSIL EGDYIELNDL VD* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0423s0140.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011029570.1 | 1e-116 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A1L6K5G3 | 1e-113 | A0A1L6K5G3_POPTO; Uncharacterized protein | ||||
STRING | POPTR_0014s02580.1 | 1e-113 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.2 | 6e-12 | NAC domain containing protein 80 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0423s0140.2.p |