PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0423s0140.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 203aa    MW: 22279.7 Da    PI: 7.5988
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0423s0140.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.47.6e-1225875128
                     NAM  75 nratksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                             +r +k gyW+ +gk ++v++   +++++g+++ +vfy+g +a+++++t Wv+ ey+l
  SapurV1A.0423s0140.1.p   2 RREAKGGYWRRSGKVRDVVVGpgGKAVMGTRTRFVFYSGnSAKSAVRTGWVLYEYAL 58 
                             68899**************99878888**********986788899*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.323174IPR003441NAC domain
SuperFamilySSF1019412.88E-16274IPR003441NAC domain
PfamPF023659.8E-6358IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MRREAKGGYW RRSGKVRDVV VGPGGKAVMG TRTRFVFYSG NSAKSAVRTG WVLYEYALVD  60
HAKASFVLCR VFVKSRGGNS ISENVVSSCA EESVSAVRTN GAHHDGFLTP DIAEAKVHDD  120
HVNMQNDLSR YSARLGRDFD DQVTTRPTSI SSFQFPSNSQ CNEVVRRTSG PTDGNMHVDA  180
ETAQQLRSIL EGDYIELNDL VD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0423s0140.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011029570.11e-116PREDICTED: NAC transcription factor 29-like
TrEMBLA0A1L6K5G31e-113A0A1L6K5G3_POPTO; Uncharacterized protein
STRINGPOPTR_0014s02580.11e-113(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130012628
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.26e-12NAC domain containing protein 80