PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0396s0080.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 163aa MW: 18526.9 Da PI: 5.674

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0396s0080.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.6	2.1e-11	29	89	3	63
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +l++ +r+ +NRe+ArrsR +K++ ++ L +L + N++ +++ +++++ + ++e+ SapurV1A.0396s0080.1.p 29 DLRKRKRMLSNRESARRSRMKKQKHLDDLMGQLGQLRKGNSEILTRMDFISQLYMNIEAEN 89 58999***********************************999999888888887776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.4E-9	25	110	No hit	No description
SMART	SM00338	9.5E-16	27	91	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.599	29	92	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-8	30	84	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.93E-11	31	83	No hit	No description
CDD	cd14702	8.60E-17	32	83	No hit	No description
PROSITE pattern	PS00036	0	34	49	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MASSSGASSG STAMLKISSS EEDLQQVMDL RKRKRMLSNR ESARRSRMKK QKHLDDLMGQ 60 LGQLRKGNSE ILTRMDFISQ LYMNIEAENS VLRAQKAELS HRLDSLNEII EYVNFSYELF 120 EFEDAVASVS ENSHQIGDGF FVNPWNSANF PENQPIMDMV MH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	51	RKRKRMLSNRESARRSRMKKQK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269\|PubMed:23461773}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0396s0080.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024456837.1	3e-83	bZIP transcription factor 2
Swissprot	C0Z2L5	4e-37	BZP44_ARATH; bZIP transcription factor 44
TrEMBL	A0A2K2AFJ8	6e-82	A0A2K2AFJ8_POPTR; Uncharacterized protein
STRING	POPTR_0005s12130.1	1e-81	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF613	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34590.1	1e-37	G-box binding factor 6

Link Out ? help Back to Top
Phytozome	SapurV1A.0396s0080.1.p

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Pedrotti L, et al. Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness. Plant Cell, 2018. 30(2): p. 495-509 [PMID:29348240]