PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0384s0230.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 303aa    MW: 32958.8 Da    PI: 9.452
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0384s0230.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.53.3e-09203227428
                             XCHHHCHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaei 28 
                             ++r +r++kNRe+A rsR+RK+++ 
  SapurV1A.0384s0230.1.p 203 DRRHKRMIKNRESAARSRARKQESA 227
                             6899******************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-9203278No hitNo description
SuperFamilySSF579591.55E-5204230No hitNo description
CDDcd147071.48E-21204287No hitNo description
PfamPF001701.0E-6204227IPR004827Basic-leucine zipper domain
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MWSSPGANID SNNTTINSKV SGNSPSKSST STCSSPSSFS PSPPIPNQSM SGASMEEVWD  60
DINLASLHDQ SRTKTSSNTN HHSFNGMIFQ DFLARPSNKD ASTRAASKEP SSGGVNSFLK  120
SALRPPPATI LSLNSGPDHF QYLESRNTVP VKPNPEMHSH TDGGTISFDS SLDSPLDALG  180
SSSLFLSVCK KRPHENGGVS GGDRRHKRMI KNRESAARSR ARKQESADPF AKLLLAKFND  240
CVMLMFYLLL ILQAYTIELE HEAAHLAEEN AKLRRQQERF LAAAPAQLPQ KHTLYRTSTA  300
PF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0384s0230.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF2886160.0AF288616.2 Populus x generosa clone 545-5183 basic leucine zipper transcription factor (PTBF1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002307742.21e-167protein FD isoform X1
TrEMBLQ9FQ011e-165Q9FQ01_9ROSI; Basic leucine zipper transcription factor
STRINGPOPTR_0005s26480.11e-166(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.19e-35bZIP family protein