PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0379s0290.9.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 327aa MW: 35092.8 Da PI: 6.961 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.1 | 3e-11 | 274 | 322 | 4 | 52 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l SapurV1A.0379s0290.9.p 274 PKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLL 322 59****************************************9998877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.7E-9 | 271 | 326 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 273 | 326 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-10 | 275 | 322 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.3E-11 | 275 | 323 | No hit | No description |
SuperFamily | SSF57959 | 4.5E-11 | 275 | 323 | No hit | No description |
CDD | cd14703 | 3.62E-24 | 276 | 323 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MEDKDGSSHS FLPPSPFNRG NAPRVGESLP PRKAHRRSNS DIPFGFSNVL QCSPPLIPLR 60 GSGGLERSLS GRENPAMAKP AQLVKKEWER GGESIAEGTG ERKSEGDVDD LFSAYMNLDN 120 IDALNSSGTD EKNGNENRED LDSRASGTKT NGGDSSDNEA ESSVNESGGS VPRGFSSSTE 180 KREGIKRSAG RDIAPTSRHC RSLSMDSFMG KLNLGEESPK LPPSPGTRPG QLSPTNSMDG 240 NAFSLEFGNG EFSGAELKKI MANEKLAEIA SADPKRAKRI LANRQSAARS KERKMRYISE 300 LEHKVQTLQT EATTLSAQLT LLQVAV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0379s0290.9.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002313753.2 | 0.0 | transcription factor RF2a | ||||
Refseq | XP_024464437.1 | 0.0 | transcription factor RF2a | ||||
TrEMBL | B9HRE7 | 0.0 | B9HRE7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0009s12830.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-100 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0379s0290.9.p |