PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0379s0290.11.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 327aa    MW: 35092.8 Da    PI: 6.961
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0379s0290.11.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.13e-11274322452
                              XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                               kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l
  SapurV1A.0379s0290.11.p 274 PKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLL 322
                              59****************************************9998877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-9271326IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.117273326IPR004827Basic-leucine zipper domain
PfamPF001706.9E-10275322IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-11275323No hitNo description
SuperFamilySSF579594.5E-11275323No hitNo description
CDDcd147033.62E-24276323No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MEDKDGSSHS FLPPSPFNRG NAPRVGESLP PRKAHRRSNS DIPFGFSNVL QCSPPLIPLR  60
GSGGLERSLS GRENPAMAKP AQLVKKEWER GGESIAEGTG ERKSEGDVDD LFSAYMNLDN  120
IDALNSSGTD EKNGNENRED LDSRASGTKT NGGDSSDNEA ESSVNESGGS VPRGFSSSTE  180
KREGIKRSAG RDIAPTSRHC RSLSMDSFMG KLNLGEESPK LPPSPGTRPG QLSPTNSMDG  240
NAFSLEFGNG EFSGAELKKI MANEKLAEIA SADPKRAKRI LANRQSAARS KERKMRYISE  300
LEHKVQTLQT EATTLSAQLT LLQVAV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0379s0290.11.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002313753.20.0transcription factor RF2a
RefseqXP_024464437.10.0transcription factor RF2a
TrEMBLB9HRE70.0B9HRE7_POPTR; Uncharacterized protein
STRINGPOPTR_0009s12830.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-100bZIP family protein