PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0379s0290.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 609aa    MW: 66277 Da    PI: 7.6951
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0379s0290.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.3e-10425483462
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                              kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+++
  SapurV1A.0379s0290.1.p 425 PKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 483
                             59********************************************9998877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-18422486IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737424487IPR004827Basic-leucine zipper domain
PfamPF001709.2E-9426480IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-10426481No hitNo description
SuperFamilySSF579593.52E-11426477No hitNo description
CDDcd147036.73E-24427476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MGETEDANSE MIQRLQSSFG TTQSSSATMS KQPFSLINQL DVSQLNLNQT QLRARHFANF  60
YQNSSGDSNK RVGIPPSHPN QIPPISPYSQ IPVSRPANQQ MGAQNFSMGP THSRSLSQPS  120
SFFCLDSLPP LSPAPFRDSS SPTDPISTDV SMEDKDGSSH SFLPPSPFNR GNAPRVGESL  180
PPRKAHRRSN SDIPFGFSNV LQCSPPLIPL RGSGGLERSL SGRENPAMAK PAQLVKKEWE  240
RGGESIAEGT GERKSEGDVD DLFSAYMNLD NIDALNSSGT DEKNGNENRE DLDSRASGTK  300
TNGGDSSDNE AESSVNESGG SVPRGFSSST EKREGIKRSA GRDIAPTSRH CRSLSMDSFM  360
GKLNLGEESP KLPPSPGTRP GQLSPTNSMD GNAFSLEFGN GEFSGAELKK IMANEKLAEI  420
ASADPKRAKR ILANRQSAAR SKERKMRYIS ELEHKVQTLQ TEATTLSAQL TLLQRDSVGL  480
TNQNNELKFR LQAMEQQAQL RDALNEALTG EVRRLKIATA ERGGDSDPSK GSVQQQHSVN  540
PQMFLQQPRP QLNRHQLQQQ QQASASQINM QQQQQASASQ INMQQQQQAS QPQPQQNGSA  600
NMKSDSNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0379s0290.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011047123.10.0PREDICTED: transcription factor RF2a
RefseqXP_011047131.10.0PREDICTED: transcription factor RF2a
TrEMBLB9HRE70.0B9HRE7_POPTR; Uncharacterized protein
STRINGPOPTR_0009s12830.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-160bZIP family protein