PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0374s0050.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 500aa MW: 55211 Da PI: 7.1535

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0374s0050.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.8	3e-10	194	235	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAA++sR+RKka++++Le+ +L++ ++L SapurV1A.0374s0050.1.p 194 AKTLRRLAQNREAAKKSRLRKKAYVQQLETSRIKLTQLEQDL 235 6889*************************9877777776666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-6	191	268	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.013	193	237	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-7	194	236	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.19E-6	195	238	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.7E-7	196	239	No hit	No description
PROSITE pattern	PS00036	0	198	213	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.0E-31	277	351	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence Send to blast
MASHRIGETG LSDSGPSNQH LPYALLHGIN APSTSFINQE GSAFDFGELE EAIVLQGVTI 60 RNDEAKAPLF TVTGRPAATL EMFPSWPIRF QETPRVGSSK SGGESTDSGS AINTLSSKAE 120 AHLEPESPIS KKVSSSDHYN QAFDQKHLQF QEKQQVDMAN DTSRTGGPSQ QNQPPAKSPQ 180 EKRKGSTSEK QLDAKTLRRL AQNREAAKKS RLRKKAYVQQ LETSRIKLTQ LEQDLQRARQ 240 QGLFLGGCGG AGGNISSGAA IFDMEYARWL EDDHRNMSEL RTGLQAHLSD GDLRAIVDGY 300 ISHYDDVFRL RAVAAKSDVF HLITGMWSTP AERCFLWMGG FRPSELIKML ISQLDPLTEQ 360 QVMGIYSLQQ SSQQAEEALS QGLEQLQQSL VDTIAGGPVI GGMQQMAVAL SKLANLEGFV 420 RQADNLRQQT LHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWASRPRE AMISEDNSCQ 480 TTTDLLMVQP SQNHNFSNF*

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence Send to blast

MASHRIGETG LSDSGPSNQH LPYALLHGIN APSTSFINQE GSAFDFGELE EAIVLQGVTI  60
RNDEAKAPLF TVTGRPAATL EMFPSWPIRF QETPRVGSSK SGGESTDSGS AINTLSSKAE  120
AHLEPESPIS KKVSSSDHYN QAFDQKHLQF QEKQQVDMAN DTSRTGGPSQ QNQPPAKSPQ  180
EKRKGSTSEK QLDAKTLRRL AQNREAAKKS RLRKKAYVQQ LETSRIKLTQ LEQDLQRARQ  240
QGLFLGGCGG AGGNISSGAA IFDMEYARWL EDDHRNMSEL RTGLQAHLSD GDLRAIVDGY  300
ISHYDDVFRL RAVAAKSDVF HLITGMWSTP AERCFLWMGG FRPSELIKML ISQLDPLTEQ  360
QVMGIYSLQQ SSQQAEEALS QGLEQLQQSL VDTIAGGPVI GGMQQMAVAL SKLANLEGFV  420
RQADNLRQQT LHQLRRILTV RQAARCFLVI GEYYGRLRAL SSLWASRPRE AMISEDNSCQ  480
TTTDLLMVQP SQNHNFSNF*

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0374s0050.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024464905.1	0.0	transcription factor TGA9 isoform X1
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A2K1Z8W2	0.0	A0A2K1Z8W2_POPTR; Uncharacterized protein
STRING	POPTR_0009s16590.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4555	33	57

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0374s0050.1.p

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]