PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0372s0110.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 404aa    MW: 44308.6 Da    PI: 8.894
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0372s0110.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY759.4e-2497154259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                              DgynWrKYG+K+vkgs++ +sYY C +++C +kkkv+++++ ++vv+++Y g+H+h+
  SapurV1A.0372s0110.1.p  97 ADGYNWRKYGRKVVKGSNNLKSYYSCVYSSCYAKKKVQHCDQSGHVVDVVYIGNHHHD 154
                             6********************************************************7 PP
2WRKY89.82.2e-28267324259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +Dgy+Wr YGqK+ kg+   rsYYrC+s+ Cp++k+ver+++d + ++itY g+H+h+
  SapurV1A.0372s0110.1.p 267 NDGYRWRNYGQKMLKGNSLVRSYYRCSSSACPARKHVERATDDATSTTITYAGKHDHD 324
                             8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-2389156IPR003657WRKY domain
SuperFamilySSF1182902.35E-2194156IPR003657WRKY domain
SMARTSM007742.6E-2296155IPR003657WRKY domain
PfamPF031063.1E-1898153IPR003657WRKY domain
PROSITE profilePS5081119.95698156IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.9E-29251326IPR003657WRKY domain
SuperFamilySSF1182905.1E-24258326IPR003657WRKY domain
PROSITE profilePS5081127.956261326IPR003657WRKY domain
SMARTSM007741.5E-28266325IPR003657WRKY domain
PfamPF031062.1E-22267323IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MSNTPVLGFQ GGNEMFQQEA CAGTKPEADR VQLEHLAECA NSPCEVFSLT SAALSFPYSA  60
PEPQKPRSMR ALGLVLNQQN SDSETRHPHV VVESPPADGY NWRKYGRKVV KGSNNLKSYY  120
SCVYSSCYAK KKVQHCDQSG HVVDVVYIGN HHHDPPQRKC IRVVSSAKHT TGSQVLDPSV  180
QKLVWLDISV CSADGRHSSL HVPESEQQSS SISNGNVGSR IKDRSDDESE SKRKIKERSA  240
PCSVPALKTK KEPGIIIHTV SDEGSSNDGY RWRNYGQKML KGNSLVRSYY RCSSSACPAR  300
KHVERATDDA TSTTITYAGK HDHDKPASKK MQCSESRLIS PAASTDDARR MKNISVSSRK  360
PSSRCSVDGE VDLMGEKLSK LGAEQVLESA QTLLSIGIDL RPR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22255326374WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0372s0110.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1796071e-143EF179607.1 (Populus tomentosa x P. bolleana) x P. tomentosa putative WRKY transcription factor 02 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446284.10.0probable WRKY transcription factor 20 isoform X1
TrEMBLA0A2K1WUF60.0A0A2K1WUF6_POPTR; Uncharacterized protein
STRINGPOPTR_0018s02550.11e-118(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16159610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-41WRKY DNA-binding protein 32