PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0354s0280.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | G2-like | ||||||||
Protein Properties | Length: 222aa MW: 25274.3 Da PI: 6.1752 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.2 | 4.3e-29 | 18 | 71 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLHe+F eav++LGG+ kAtPk+il++m+vk L ++h+kSHLQ+YR+ SapurV1A.0354s0280.1.p 18 PRLRWTPELHEHFAEAVDRLGGKYKATPKRILQTMSVKELKISHIKSHLQMYRS 71 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.1E-27 | 15 | 72 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.27E-14 | 16 | 71 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.7E-22 | 18 | 71 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.1E-7 | 19 | 70 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MDTSQKNGAR RYKKSEHPRL RWTPELHEHF AEAVDRLGGK YKATPKRILQ TMSVKELKIS 60 HIKSHLQMYR SMDSPMKEPL QAERILHYDM GMSSSFSSQR LLQGECLIQL ECQGSDSKCD 120 HRFSDESNGI LQAKEGGGDP EQQDSGTSFA VSKSREEIID RLPAETCELS LSFTPSMACC 180 TTEERELWPL INDQHHREYN STINGQDLQF ESSHINLDLT I* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 8e-17 | 19 | 71 | 3 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-17 | 19 | 71 | 3 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-17 | 19 | 71 | 3 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-17 | 19 | 71 | 3 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 8e-17 | 19 | 71 | 4 | 56 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0354s0280.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011026215.1 | 1e-115 | PREDICTED: uncharacterized protein LOC105126894 isoform X1 | ||||
Refseq | XP_011026216.1 | 1e-115 | PREDICTED: uncharacterized protein LOC105126894 isoform X1 | ||||
TrEMBL | A0A2K2BE09 | 1e-107 | A0A2K2BE09_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s05770.1 | 1e-109 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9186 | 28 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 5e-25 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0354s0280.1.p |