PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0334s0020.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 545aa    MW: 59030.1 Da    PI: 6.3584
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0334s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30209268159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed++++++tYeg+Hnh+
  SapurV1A.0334s0020.1.p 209 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCAEDTTILITTYEGTHNHP 268
                             58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-31195270IPR003657WRKY domain
SuperFamilySSF1182904.71E-27201270IPR003657WRKY domain
PROSITE profilePS5081128.426204270IPR003657WRKY domain
SMARTSM007741.2E-35209269IPR003657WRKY domain
PfamPF031064.0E-26210268IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    Send to blast
MPSSGGAAVE ERAVQFGLTS REDSGCSQEA KKEEVIESAK SEMGDVREEN QRLKMMLERI  60
EKDYKSLQLR FFDILQHETS SKQSTDSAPS HDETEESNEL VSLCLGRSPT EPKKEDKSTN  120
SAKSTENEEL KANLTLGLDS KILTSAETAL SNPSPAESVE EPKEEEAGET WPPSKVIPKR  180
NGDHDEAAQQ SPPKRARVCV RTRCDTPTMN DGCQWRKYGQ KISKGNPCPR AYYRCTVAPS  240
CPVRKQVQRC AEDTTILITT YEGTHNHPLP VSATAMASTT SAAASMLLSG SSTSQQDLVS  300
HINGTSARTE LNGLSLSLHD QYLRANKQLY FPNSSSPMFP TITLDLTTSP STSSTPFGRF  360
SSSFRSTSRF PSTSLNFSST ESNSLPPIWG NGLHNYGTRS YNNQQLYQSF IEKNHQAVAS  420
QQVLTETLTK AITSDPSFRT VIATAISSMM GGGSGASANN RNQRVGDQNC FGQNLNFGET  480
STASAFSINS LTQNGKGCAS SCFNGLSSST STSQKGSPLQ PALPFSVFNS SSMPNTDNIE  540
EHKS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22196270174WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0334s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852881e-31KC485288.1 Jatropha curcas WRKY transcription factor 36 (WRKY36) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002323839.30.0probable WRKY transcription factor 72
SwissprotQ9LXG81e-118WRK72_ARATH; Probable WRKY transcription factor 72
TrEMBLA0A2K1X4U10.0A0A2K1X4U1_POPTR; Uncharacterized protein
STRINGPOPTR_0017s11570.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-97WRKY DNA-binding protein 72