PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0322s0160.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 505aa    MW: 55624.4 Da    PI: 8.6606
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0322s0160.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.62.6e-33244300259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +DgynWrKYGqK++kgse+prsYY+Ct+ +Cpvkkkvers+ d++++ei+Y+geHnh+
  SapurV1A.0322s0160.2.p 244 HDGYNWRKYGQKPIKGSEYPRSYYKCTHVNCPVKKKVERSS-DGQITEIIYKGEHNHD 300
                             7****************************************.***************7 PP
2WRKY361.4e-11423444122
                             ---SS-EEEEEEE--TT-SS-E CS
                    WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                             ldDgy+WrKYGqK+vkg+++pr
  SapurV1A.0322s0160.2.p 423 LDDGYRWRKYGQKVVKGNPHPR 444
                             59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081124.983238302IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-29240302IPR003657WRKY domain
SuperFamilySSF1182902.09E-26242302IPR003657WRKY domain
SMARTSM007741.7E-37243301IPR003657WRKY domain
PfamPF031066.7E-26245300IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.4E-13408444IPR003657WRKY domain
SuperFamilySSF1182905.62E-10415445IPR003657WRKY domain
PROSITE profilePS5081115.663418444IPR003657WRKY domain
SMARTSM007742.1E-4423459IPR003657WRKY domain
PfamPF031061.4E-7424445IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MAEKQQNLTT TATAPGKPTI TLPPRPSMET FFTGGLSPGP MTLVSSFFAD TPYPESDYRS  60
FSQLLAGAMA SPIARPAFFT DHPIPNNNTN TATATSSKDD AFYSNSNLGF KQSRPMNLVV  120
ARSPLFTVPP GLSPSGLLNS PGFFSPQSPF GMSHQQALAQ VTAHAALLAQ SQMHMHSQYQ  180
TSSATAPTEL LTRHPSLNPG EALQQQQQMP HSTSDTKNSM AELAEFSHSE RKYQPPAAVD  240
KPTHDGYNWR KYGQKPIKGS EYPRSYYKCT HVNCPVKKKV ERSSDGQITE IIYKGEHNHD  300
PPQSNKRSKD GNDSNGSIRS QSKPEDGSQA QAGTAIKLTE TLPAHSVTGT DQESTKANPS  360
EPPGSSDSEE AGDAAVPEEE RGDDEPNPKR RQVNVVTSEA TLPHKTVTEP KIIVQTRSEV  420
DLLDDGYRWR KYGQKVVKGN PHPRWLLLYF FLFMFFYPIQ VYPRGLSVST ILAHYIVCFI  480
PDPAVLVPSQ FKILKIFGKF FHRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A7e-182453021674WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00260DAPTransfer from AT2G03340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0322s0160.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011035813.10.0PREDICTED: probable WRKY transcription factor 3
TrEMBLA0A2K1X5D20.0A0A2K1X5D2_POPTR; Uncharacterized protein
STRINGPOPTR_0017s12430.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-110WRKY DNA-binding protein 4