PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0318s0110.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | WRKY | ||||||||
Protein Properties | Length: 192aa MW: 21377.6 Da PI: 7.9967 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.4 | 1.6e-29 | 101 | 159 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+YY+C+s+gC+vkk+ver++ed ++v++ Y g Hnhe SapurV1A.0318s0110.1.p 101 MDDGFKWRKYGKKSVKNSPHPRNYYKCSSSGCSVKKRVEREREDSRYVITAYDGVHNHE 159 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.8E-32 | 87 | 161 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.15E-27 | 93 | 161 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.813 | 96 | 161 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-32 | 101 | 160 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.0E-23 | 102 | 159 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MGCPENPKPN YNFSYIDEGL DPSTIEFQVS DYLMLDDGFA VDDSSSQSIL SSEHVASGSS 60 AGHSGATSRN NSIKHKTGAK KNKTEVEQRI AFRTKSDMEI MDDGFKWRKY GKKSVKNSPH 120 PRNYYKCSSS GCSVKKRVER EREDSRYVIT AYDGVHNHES PCMFHYSNQM PLMAPSAWTL 180 QPSSLHSSSS S* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-25 | 89 | 161 | 2 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0318s0110.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024461002.1 | 1e-108 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A2K1ZR01 | 1e-107 | A0A2K1ZR01_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0007s06720.1 | 1e-105 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1120 | 34 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 1e-38 | WRKY DNA-binding protein 51 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0318s0110.1.p |