PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0316s0140.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | WRKY | ||||||||
Protein Properties | Length: 633aa MW: 67471.5 Da PI: 6.5767 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.5 | 1.8e-30 | 358 | 416 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ SapurV1A.0316s0140.1.p 358 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 416 7***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.1E-33 | 342 | 418 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-27 | 351 | 418 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.044 | 352 | 418 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.4E-36 | 357 | 417 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.4E-27 | 359 | 416 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence Send to blast |
MAKGRGVLSI DSDPLSTASA SFLHSLTVLN SFPDQDNIIN PRLKQLSVSA AAAAGRAMDA 60 TSTGSPPSTI QFPVKLMNTN GVGDDGGGDD HDSSFPRDYR RRPVIDEMDF FAHKKRDDGN 120 PMTITNSSAD DLKEYSGSPA GLELNVNTGL NLLTTNTSSD QSMVDDGISS NMEDKRAKSE 180 LAVLQAEVER MKAENLRLTD MLNHVTSNYN ALQMHLVTAV QDQKTHHKNE QQDDGKNKNN 240 GMAPRQFMDL GLVAGGGAGG DTDDLSLSAT SEGGRSRDRS RSPGNNIEDN NKEDGTTVVF 300 DQDKKGGNDH REDSPAGQGW ASNKVARLNP TKTVDQTEAT IRKARVSVRA RSEDAMISDG 360 CQWRKYGQKL AKGNPCPRAY YRCTMAAGCP VRKQVQRCAE DRTILITTYE GNHNHPLPPA 420 AMAMASTTSS AARMLLSGSM SSTDGLMNSN FLTRTLLPCS ANLATISASA PFPTVTLDLT 480 QNPNPLQLPK QPTQFQFPFP NPPQKLGTAS ASALLPQIFG QALYNQSKFS GLQMSHDTEA 540 SRLGQQSQPA SQQGQQNSLA DSLTAATAAI AADPNFTAAL AAAITSIIGG AHQNNINSTN 600 NAQTTAINSN GNISNSNSNG HNKNSNPSFP DN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-22 | 344 | 420 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796). Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000269|PubMed:12000796, ECO:0000269|PubMed:25733771}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0316s0140.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002321134.3 | 0.0 | probable WRKY transcription factor 31 | ||||
Swissprot | Q9C519 | 1e-136 | WRKY6_ARATH; WRKY transcription factor 6 | ||||
TrEMBL | A0A2K1XWC2 | 0.0 | A0A2K1XWC2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0014s15320.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF866 | 34 | 121 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 3e-97 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0316s0140.1.p |