PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0309s0130.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | G2-like | ||||||||
Protein Properties | Length: 462aa MW: 51827.3 Da PI: 5.4819 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.1 | 2.1e-33 | 229 | 283 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l++m+v++Lt++hvkSHLQkYR+ SapurV1A.0309s0130.1.p 229 KPRMRWTPELHEAFVEAVSQLGGSERATPKGVLKHMNVESLTIYHVKSHLQKYRT 283 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.428 | 226 | 286 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.51E-18 | 227 | 283 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.3E-31 | 228 | 285 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.5E-24 | 229 | 283 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.4E-10 | 231 | 282 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.2E-24 | 314 | 360 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MSSSFPVLPT TVDEKHPNLL FSFQVSLERE MMRNPASHQA SPLSPGNRSV GPMFSSSSRF 60 SNDMHVSSVS AQGRQSHNSP FTSQSLRNRE DFTPTHDSHS EVQSTEFIAY SDENKDLSWS 120 VDSLLDFAEN VPVQNSQVES SAGVFASEDH ANRTNWQEWA DQLISVDDDL EPHWSDILND 180 VNKTDSRQKE LKPSPNISVQ QPPIHQHQTA HSGEVCAVAN PLSPAPPTKP RMRWTPELHE 240 AFVEAVSQLG GSERATPKGV LKHMNVESLT IYHVKSHLQK YRTARYKPES SCGTSERKMS 300 PIEEIKSLDL KASMGITEAL RMQMEVQKRL HEQLEIQRNL QLRIEEQGRY LQEMFEKQRK 360 REDDKSKAPS SSLDDPSLLQ AKLEQSSTNN KLVASELDIV KTSNEIALPE ESSPSISRKQ 420 KAPEERNDQV LDQIEEESSP APTKRPRRDE SAELSTGAAS N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-28 | 229 | 287 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00532 | DAP | Transfer from AT5G29000 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0309s0130.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024439691.1 | 0.0 | protein PHR1-LIKE 1 isoform X1 | ||||
Swissprot | Q8GUN5 | 5e-99 | PHL1_ARATH; Protein PHR1-LIKE 1 | ||||
TrEMBL | B9I5P9 | 0.0 | B9I5P9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0013s04530.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1512 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.2 | 4e-99 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0309s0130.1.p |
Publications ? help Back to Top | |||
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