PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0307s0080.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | G2-like | ||||||||
Protein Properties | Length: 412aa MW: 45873 Da PI: 6.3075 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.8 | 1.2e-33 | 202 | 256 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtp+LHe+Fveav+qLGGse+AtPk +l+ m+v+gLt++hvkSHLQkYR+ SapurV1A.0307s0080.2.p 202 KSRMRWTPDLHEAFVEAVNQLGGSERATPKGVLKQMNVEGLTIYHVKSHLQKYRT 256 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.898 | 199 | 259 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.34E-17 | 200 | 256 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.9E-31 | 201 | 258 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-24 | 202 | 256 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.5E-10 | 204 | 255 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.8E-23 | 289 | 334 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence Send to blast |
MIRNLASQQA SPLSSGNGSV GHLVSSSSRF TNDMNVSAVS PQGKQSHNSS FISQSQRGGG 60 NFPPTHYCHS EGHSTAFINH SDDNKDLSWP IDPLQDFHNF VENVPVQNGQ VESTVGVIAS 120 EDHAKRTDWQ EWADQLISVD DELEPDWSEI LNDVNMKDSK LKMLSPSPNN SVQQPLIHQH 180 QTAHSGEVCA VTNPLLAAPP TKSRMRWTPD LHEAFVEAVN QLGGSERATP KGVLKQMNVE 240 GLTIYHVKSH LQKYRTARYK PESSEGTSEK KLSPVEEMKS LDLKTSTGIS EALRLQMEVQ 300 KQLHEQLEIQ RNLQLRIEEQ GRYLQEMFEK QRKMEVDKSK APPPSQNDPS LLQSKLERSP 360 ANDKLEASGL DCVKTRFDTC NASGLLEESS QSISRKHKAP EDRNGQVVDK N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-30 | 202 | 260 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0307s0080.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011036348.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like isoform X4 | ||||
Refseq | XP_011036349.1 | 0.0 | PREDICTED: protein PHR1-LIKE 1-like isoform X4 | ||||
Swissprot | Q8GUN5 | 5e-95 | PHL1_ARATH; Protein PHR1-LIKE 1 | ||||
TrEMBL | A0A2K1WN81 | 0.0 | A0A2K1WN81_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0019s03750.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G29000.3 | 7e-98 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0307s0080.2.p |
Publications ? help Back to Top | |||
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