PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0208s0130.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 480aa    MW: 52920.4 Da    PI: 8.6027
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0208s0130.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.11.9e-08126188163
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             eke +r rr   NRe+Ar   +R++a +eeL++k++ L+ eN+ Lkke e   k++++l++ +
  SapurV1A.0208s0130.1.p 126 EKEERRLRRILANRESARQTIRRRQALCEELTRKAADLSWENENLKKEKELALKNYQSLETTN 188
                             78999****************************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.2E-5124186No hitNo description
PfamPF001701.5E-7126188IPR004827Basic-leucine zipper domain
SMARTSM003382.8E-11126190IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.461128191IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.22E-5130182No hitNo description
CDDcd147026.32E-14131182No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MDLDLERRSV SSSDSSSAAD RIELEAAEAL ADLAHSAMRE SSGIEWGSKG KRARKRVRAE  60
SDSVSTCSDL PRQDRAAVDE QPIHRNAVKP AKQELDADVP KSSPSCATSY PSYGTGRSRL  120
NLTEAEKEER RLRRILANRE SARQTIRRRQ ALCEELTRKA ADLSWENENL KKEKELALKN  180
YQSLETTNKH LKAQMAKQIK AEMEASPRDL KAAHADIPTT APTNCPLLVY NQHAFSPQCW  240
PSIIQSSNPI QSHYTTENAI VIPSNLPIPT NGTHDSSQLQ HETSVIFSGP RTPLYVVTCP  300
WFFPGPDHGN GLHAQPSFSF KQRQDGTSLN NLCRGSSSPK AAAPMENWHS SISIKVKSET  360
ASSEEFRVIN DLNETPVGLT LDEGGQCEMI FTPVPPTSVT PAISVKNEAG PKSEYAFGAN  420
GICTKANQLR YVLPEKNQDP LKFPSKKLVD AASAAEARRR RKELTKLKNL HGSQCRLNC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15258ARKRVRA
2457462RRRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0208s0130.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006381298.10.0uncharacterized protein LOC18100054 isoform X1
TrEMBLB9MTQ40.0B9MTQ4_POPTR; Uncharacterized protein
STRINGPOPTR_0006s11550.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-58bZIP family protein