PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0196s0260.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 472aa    MW: 51969.7 Da    PI: 7.3959
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0196s0260.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10186228547
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                             k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L+k
  SapurV1A.0196s0260.1.p 186 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQK 228
                             788*************************988888887777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-8182245IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438184228IPR004827Basic-leucine zipper domain
CDDcd147087.78E-21186238No hitNo description
PfamPF001701.8E-7186228IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7186229No hitNo description
Gene3DG3DSA:1.20.5.1708.5E-8187231No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
PfamPF141446.2E-31268343IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MGSRTHNNNN SNDNNNNKAV TEMPSYVPQL SSSNPTGTEA NNIRPSRVSD FATFEQSLGF  60
RMDDAVDLSR NSIFNQLKSS SHAIGAGVQF GTLNKSLASS DINLSAAIVG SQTLPLQKEV  120
QVNPVSTHSN HPENWGETNM AEASPRTDTS TDDTDEKNQR FERGQSTAIA ASDSSDKSKE  180
KAGDQKTLRR LAQNREAARK SRLRKKAYVQ QLESSRLKLT QLEQELQKAR QQGIFISSSG  240
DQTHSMSGNG ALAFDAEYAR WLEEQNRQIS ELRAAVNSHA GDTELRTIVD NVAGHFSDVF  300
RLKGTAAKAD VFHILSGMWK TPAERCFMWI GGFRSSELLK LLMNQLEPLT EQQLMSIFNL  360
QQSSQQAEDA LSQGMEALQQ SLAETLANGN PGSSGSNGNV ANYMGQMAMA MGKLGTLEGF  420
LRQADNLRQQ TLEQLHRILT TRQSARALLA IHDYFSRLRA LSSLWLARPQ E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0196s0260.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1951200.0EF195120.1 Populus tremula x Populus alba TGA transcription factor 2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024459464.10.0transcription factor TGA2.3 isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLB9H9250.0B9H925_POPTR; BZIP family protein
STRINGPOPTR_0006s03720.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-142bZIP family protein