PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0184s0070.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 467aa    MW: 51164.3 Da    PI: 8.1151
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0184s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY863.3e-27128185259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                              DgynWrKYGqK+vkgs+++rsYYrC ++ C++kkkv+++ + ++vv+++Y g+Hnhe
  SapurV1A.0184s0070.1.p 128 ADGYNWRKYGQKSVKGSKNSRSYYRCVHSICNAKKKVQHCCQSGRVVDVVYIGDHNHE 185
                             6********************************************************8 PP
2WRKY93.41.7e-29330386258
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                             +Dgy+WrKYGqK+ kg+ f rsYYrCts+gCp++k+ver+  + + ++itYeg+H+h
  SapurV1A.0184s0070.1.p 330 NDGYRWRKYGQKMLKGNSFIRSYYRCTSSGCPARKHVERAVGEATSTTITYEGKHDH 386
                             8******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.7E-26122187IPR003657WRKY domain
SuperFamilySSF1182908.37E-23125187IPR003657WRKY domain
SMARTSM007748.4E-28127186IPR003657WRKY domain
PfamPF031061.5E-21129185IPR003657WRKY domain
PROSITE profilePS5081122.722129187IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-29314389IPR003657WRKY domain
PROSITE profilePS5081128.679324389IPR003657WRKY domain
SuperFamilySSF1182905.36E-25326389IPR003657WRKY domain
SMARTSM007742.7E-33329388IPR003657WRKY domain
PfamPF031061.7E-23330386IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MQEQRKYQKE DSDIGFKNYD FSSFSQLLKK VMTSSNPPGF QGQNEMFQRD AQVGAKPEAD  60
RGRLEHEAEC AHTSSEALSD TPAAIPVPHS ASVTQKPMSK CELGLVIDQQ NSHHEIGLPR  120
VVMDAPFADG YNWRKYGQKS VKGSKNSRSY YRCVHSICNA KKKVQHCCQS GRVVDVVYIG  180
DHNHEAPHRK CIRVISSAKP TVGSQIADPS VQKLDQLDSS VCSADGRRSS LHVPESEQQS  240
SSSSNGNVGA RIEEKNSDES ESKRCFAPRA VGPQQNDPCG IACSGVQEKH GAEPRLKIRI  300
KERSAAHSVP VLKKEPEIAV NAVPDEGSSN DGYRWRKYGQ KMLKGNSFIR SYYRCTSSGC  360
PARKHVERAV GEATSTTITY EGKHDHGMPV PKRRQGSESC LISPAATTDD ACCKKNRILS  420
SLEHSSKFSV ESAVDLMDEK ILELGDVEAL ESAQTLLSIG GELKPC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-211293891574WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0184s0070.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774350.0GQ377435.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 15 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006382109.20.0probable WRKY transcription factor 32 isoform X1
TrEMBLC9DI040.0C9DI04_9ROSI; WRKY transcription factor 15
STRINGXP_002515427.11e-111(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16159610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-44WRKY DNA-binding protein 3