PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0167s0060.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 456aa MW: 49425.8 Da PI: 8.6346

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0167s0060.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.6	8.5e-16	328	378	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ SapurV1A.0167s0060.1.p 328 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQAEMMEM 378 79****************************************998887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.6E-15	323	376	No hit	No description
SMART	SM00338	1.3E-14	324	388	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.53	326	377	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.6E-13	328	379	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.81E-11	328	377	No hit	No description
CDD	cd14707	5.64E-28	328	382	No hit	No description
PROSITE pattern	PS00036	0	331	346	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence Send to blast
MGSDFNFKNF SNDPSDACGG RPPGNFPLTR QSSIYSLTFD ELQNAMGGSL GKDFGSMNMD 60 ELLKNIWSAE ESQTMAAATS SGVQESGGLQ RQGSLTLPRT LSQRTVDEVW KDMSKEYVIN 120 GTSAGAANNV PQRQPTLGEI TLEDFLVRAG VVREDIQEAA RVNTNGGFLG DLSRSANNSL 180 AIGFQQNRGV GLNNDNTNQI SLQSSNLPLN VNGVRSNQPQ VQQQQQIFPN QPNIGYVTHM 240 PLQNGPGIRG GLLEIGDQGI DGGLMQGGGM GVVGLGGIAT GSPANQLSSD GIGKSNGDTS 300 SVSPVPYVFR ESVRGRRAGG AVEKVVERRQ RRMIKNRESA ARSRARKQAY TMELEAEVAK 360 LKEENEELRK KQAEMMEMQK NQVPNLSVAL SIDLKIANNL AYLLIACLMT SPCSYKVFMY 420 FPTYHIKCLR NVNKRRYILC ASVCTNSVFA CSMVT*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence Send to blast

MGSDFNFKNF SNDPSDACGG RPPGNFPLTR QSSIYSLTFD ELQNAMGGSL GKDFGSMNMD  60
ELLKNIWSAE ESQTMAAATS SGVQESGGLQ RQGSLTLPRT LSQRTVDEVW KDMSKEYVIN  120
GTSAGAANNV PQRQPTLGEI TLEDFLVRAG VVREDIQEAA RVNTNGGFLG DLSRSANNSL  180
AIGFQQNRGV GLNNDNTNQI SLQSSNLPLN VNGVRSNQPQ VQQQQQIFPN QPNIGYVTHM  240
PLQNGPGIRG GLLEIGDQGI DGGLMQGGGM GVVGLGGIAT GSPANQLSSD GIGKSNGDTS  300
SVSPVPYVFR ESVRGRRAGG AVEKVVERRQ RRMIKNRESA ARSRARKQAY TMELEAEVAK  360
LKEENEELRK KQAEMMEMQK NQVPNLSVAL SIDLKIANNL AYLLIACLMT SPCSYKVFMY  420
FPTYHIKCLR NVNKRRYILC ASVCTNSVFA CSMVT*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0167s0060.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	DQ487100	0.0	DQ487100.1 Populus suaveolens abscisic acid responsive element-binding protein 2 (ABF2) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011017194.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q4	1e-123	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	B9GNV5	0.0	B9GNV5_POPTR; Uncharacterized protein
STRING	POPTR_0002s12710.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-98	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	SapurV1A.0167s0060.1.p

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]