PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0158s0160.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 248aa    MW: 28010.1 Da    PI: 5.9212
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0158s0160.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-2952110259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             +D ++WrKYG+K++kgs++pr+YYrC+++ gC++kk+ver+++d +v++itY+++Hnh+
  SapurV1A.0158s0160.1.p  52 SDLWSWRKYGKKPIKGSPHPRGYYRCSTSkGCSAKKQVERCRTDASVLIITYTSNHNHP 110
                             699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-3145112IPR003657WRKY domain
SuperFamilySSF1182903.27E-2549112IPR003657WRKY domain
SMARTSM007741.3E-3451111IPR003657WRKY domain
PROSITE profilePS5081130.41252112IPR003657WRKY domain
PfamPF031061.6E-2453110IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MDSSPSRKLG SNVSELTQEI QTSKRRKVVE KTVVRVRIGE NAGKLKNEGP PSDLWSWRKY  60
GKKPIKGSPH PRGYYRCSTS KGCSAKKQVE RCRTDASVLI ITYTSNHNHP GPDLHESNLN  120
QQSKDPETPP TGHLDLPTTP KQEKPEEETE EEEHDHPIVP SCADENVCQG NSFHYLQSPI  180
RFSQDIMISQ EDPFADNSEK SHHTLGIVLD EEPISCSRLM PFSAPKPEEN NDFFDELEEL  240
PHIFVFH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-20531121879Disease resistance protein RRS1
5w3x_D3e-20531121879Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0158s0160.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774230.0GQ377423.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 3 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002301514.21e-153probable WRKY transcription factor 69 isoform X1
RefseqXP_024451788.11e-153probable WRKY transcription factor 69 isoform X1
TrEMBLB9GST51e-152B9GST5_POPTR; WRKY family protein
STRINGPOPTR_0002s19630.11e-153(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-32WRKY DNA-binding protein 35