PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0134s0060.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 311aa MW: 34553.9 Da PI: 5.0051 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44 | 4.9e-14 | 228 | 283 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + +r++r++kNRe+A rsR+RK+a++ eLe + Le+eN++L k ee++ke k SapurV1A.0134s0060.1.p 228 AQQRQKRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKAKEEMTKERFK 283 679*****************************************999999888654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-12 | 224 | 284 | No hit | No description |
SMART | SM00338 | 3.6E-11 | 226 | 290 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.795 | 228 | 280 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.3E-13 | 228 | 285 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.74E-9 | 230 | 281 | No hit | No description |
CDD | cd14707 | 3.49E-18 | 230 | 279 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 233 | 248 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MASSKVLTSS KPRNSDLSST TSSRPRRATS SSATNTTAKP AYQSSDRLFQ KESTMTVDGI 60 LRNVYASPST ESTLLDAQIT LMESPDLLPH PQIETDDTDD QDMSDVIPQE NKTADDIWRE 120 IVVGRKEMKD EPDEMMTLED FLAKAGAVDV VGEDGDEVKM PPPERMSGGL YAFDSLPPSS 180 FQVLDKLEGS IVGFGDGMEV ELVAGSGSGG GRGKRGRGVV MEPLDKAAQQ RQKRMIKNRE 240 SAARSRERKQ AYQVELESLA VRLEEENEQL LKAKEEMTKE RFKQLMEKVV PVVEKRRPRR 300 ALRRVNSLQW * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0134s0060.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011042861.1 | 1e-170 | PREDICTED: G-box-binding factor 4-like | ||||
Swissprot | P42777 | 2e-55 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | U5GP20 | 1e-161 | U5GP20_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s06800.1 | 1e-162 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 1e-52 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0134s0060.1.p |