PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0131s0430.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 452aa    MW: 48500.4 Da    PI: 4.9771
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0131s0430.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.2e-29238296259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dpk+++itY++eHn +
  SapurV1A.0131s0430.1.p 238 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPKMLVITYTSEHNQP 296
                             699************************998**************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.9E-30231298IPR003657WRKY domain
PROSITE profilePS5081132.478232298IPR003657WRKY domain
SuperFamilySSF1182903.01E-25235298IPR003657WRKY domain
SMARTSM007741.2E-35237297IPR003657WRKY domain
PfamPF031061.8E-24239294IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MDNYQGDLTD ILRASTGGAL GQSDVPVSDW EFPSDPMNLA SPSIMGDSTR VNGFGDPFCN  60
MRDPLLHELN VAGSSYFSSR SSADHMLSTT SVDQDHTSNN FAGANSAAAG ACSNILARQK  120
VLEDHVMHKA AAAATSNVFS RIQISPNNPT KLPVSPCNSP VIATCSSPRG FKPSAMVSSD  180
IINVNNSKGC LIDSTGSVQI SSPRNLGIKR RKSQAKKVVC IPAPAAANSR SSGEVVPSDL  240
WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS ARKQVERSRN DPKMLVITYT SEHNQPWPTQ  300
RNALAGSTRS QPTKNSAAPK GSTANTKEDQ KEGSNDTLSP ADIGGGSSSA SAYVKEEFDE  360
IEKQMEMEDD EFISTEGFSH NYRPSIPAGQ SDQDLFAELG EIDADPLDLL FTQDFNGEEQ  420
EESKASDPIF SIFDWSEDPN TSFGQAGRPG L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B5e-23212299280Disease resistance protein RRS1
5w3x_D5e-23212299280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0131s0430.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024436664.10.0probable WRKY transcription factor 14
TrEMBLB9I0X20.0B9I0X2_POPTR; Uncharacterized protein
STRINGPOPTR_0011s16050.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54303454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-97WRKY DNA-binding protein 14