PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0130s0130.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 247aa MW: 27234.4 Da PI: 8.7146 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.8 | 5.7e-09 | 204 | 227 | 4 | 27 |
XCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkae 27 ++r +r++kNRe+A rsR+RK+++ SapurV1A.0130s0130.1.p 204 DRRHKRMIKNRESAARSRARKQES 227 689*******************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57959 | 1.97E-5 | 205 | 228 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-6 | 205 | 226 | No hit | No description |
CDD | cd14707 | 3.77E-13 | 205 | 226 | No hit | No description |
Pfam | PF00170 | 7.2E-7 | 205 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 208 | 223 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MLSPTHCEGT SYNDKTKSLR KVSSSISSKS SSTSPSPSIF PPSNNLLCQA QQKAETMEEV 60 WKDISLASLH DHTPTDQELS MTSRLHSISH RHHHNSSPNF ILQDFLARPF NKDPPTRMVS 120 IIRDSTPFGS PLPPPATVLS LNSGPGFDFL DNSDHPQRPN SQLQSNPISN ISSFTSPFEG 180 LDSSPGLPSF CKKRSQESDG SSGDRRHKRM IKNRESAARS RARKQESPFL LKDCCVCTGA 240 NFLFCF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0130s0130.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024456681.1 | 1e-123 | protein FD | ||||
Swissprot | Q84JK2 | 1e-41 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2K2AF21 | 1e-101 | A0A2K2AF21_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s11140.1 | 1e-126 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-41 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0130s0130.1.p |