PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0125s0260.3.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 477aa MW: 52975.4 Da PI: 7.5276

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0125s0260.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1.1e-10	194	236	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+ SapurV1A.0125s0260.3.p 194 SKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDLQ 236 6889*************************98888887776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-7	191	254	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.4E-8	193	238	No hit	No description
PROSITE profile	PS50217	9.163	193	237	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.75E-7	195	237	No hit	No description
Pfam	PF00170	1.3E-7	195	236	IPR004827	Basic-leucine zipper domain
CDD	cd14708	7.90E-22	195	247	No hit	No description
PROSITE pattern	PS00036	0	198	213	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.0E-32	274	348	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence Send to blast
MASHRVGETG LSNSLPSNHH LPCALVHGIN TPSSSYINQG GSAFDFGGLE EAIVLQGVQI 60 RNDEAKAPLF TVAGRRAASL EMSPSWPIRF QQTPRGSSRS GGESTDSGSA TNTLSSKADT 120 HLEPESPISK RASFSDHYNQ AFDQKHLQFQ EQQQVNMAND TSRTGGGPSQ QNQSPAKTPH 180 EKRKVSTSEN PLDSKTLRRL AQNREAARKS RLRKKAYVQQ LETSRIKLSQ LEQDLQRARQ 240 QGLFLGGAGG NISSGPAIFD MEYARWLEED HQLMSELRTA LHAHLSDGEL RAIVDGYISH 300 YDEIFRLKVE AAKSDVFHLI TGMWSTPAER CFLWIGGFRP SELIKMLISQ LDPLTEQQVM 360 GIYSLQHSSQ QAEEALSQGL EQLQQSLVDT IAGGPVTGGM QQMVVALGKL SNLEGFLRQA 420 DNLRQQTLHQ LRRILTVRQV ARSFLVIGEY YGRLRALSTL WSSRPREVLF WQDDDE*

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence Send to blast

MASHRVGETG LSNSLPSNHH LPCALVHGIN TPSSSYINQG GSAFDFGGLE EAIVLQGVQI  60
RNDEAKAPLF TVAGRRAASL EMSPSWPIRF QQTPRGSSRS GGESTDSGSA TNTLSSKADT  120
HLEPESPISK RASFSDHYNQ AFDQKHLQFQ EQQQVNMAND TSRTGGGPSQ QNQSPAKTPH  180
EKRKVSTSEN PLDSKTLRRL AQNREAARKS RLRKKAYVQQ LETSRIKLSQ LEQDLQRARQ  240
QGLFLGGAGG NISSGPAIFD MEYARWLEED HQLMSELRTA LHAHLSDGEL RAIVDGYISH  300
YDEIFRLKVE AAKSDVFHLI TGMWSTPAER CFLWIGGFRP SELIKMLISQ LDPLTEQQVM  360
GIYSLQHSSQ QAEEALSQGL EQLQQSLVDT IAGGPVTGGM QQMVVALGKL SNLEGFLRQA  420
DNLRQQTLHQ LRRILTVRQV ARSFLVIGEY YGRLRALSTL WSSRPREVLF WQDDDE*

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0125s0260.3.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024455751.1	0.0	transcription factor TGA9 isoform X2
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A2K2AXH8	0.0	A0A2K2AXH8_POPTR; Uncharacterized protein
STRING	POPTR_0004s21360.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0125s0260.3.p

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]