PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0125s0260.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 501aa MW: 55620.3 Da PI: 7.8527 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34 | 6.4e-11 | 194 | 236 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L+ SapurV1A.0125s0260.1.p 194 SKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDLQ 236 6889*************************98888887777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-5 | 191 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.163 | 193 | 237 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.6E-8 | 193 | 238 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-7 | 195 | 242 | No hit | No description |
Pfam | PF00170 | 3.2E-8 | 195 | 236 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 198 | 213 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.1E-32 | 278 | 352 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence Send to blast |
MASHRVGETG LSNSLPSNHH LPCALVHGIN TPSSSYINQG GSAFDFGGLE EAIVLQGVQI 60 RNDEAKAPLF TVAGRRAASL EMSPSWPIRF QQTPRGSSRS GGESTDSGSA TNTLSSKADT 120 HLEPESPISK RASFSDHYNQ AFDQKHLQFQ EQQQVNMAND TSRTGGGPSQ QNQSPAKTPH 180 EKRKVSTSEN PLDSKTLRRL AQNREAARKS RLRKKAYVQQ LETSRIKLSQ LEQDLQRARQ 240 QVFNNGLFLG GAGGNISSGP AIFDMEYARW LEEDHQLMSE LRTALHAHLS DGELRAIVDG 300 YISHYDEIFR LKVEAAKSDV FHLITGMWST PAERCFLWIG GFRPSELIKM LISQLDPLTE 360 QQVMGIYSLQ HSSQQAEEAL SQGLEQLQQS LVDTIAGGPV TGGMQQMVVA LGKLSNLEGF 420 LRQADNLRQQ TLHQLRRILT VRQVARSFLV IGEYYGRLRA LSTLWSSRPR ETMMSEDNSC 480 QTTTDLQMVH PAQNHHFANF * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0125s0260.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024455751.1 | 0.0 | transcription factor TGA9 isoform X2 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A2K2AXH8 | 0.0 | A0A2K2AXH8_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s21360.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4555 | 33 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0125s0260.1.p |
Publications ? help Back to Top | |||
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