PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0110s0140.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 310aa MW: 33988.3 Da PI: 6.7997 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.2e-11 | 228 | 271 | 14 | 57 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 Re+ArrsR RK+a + eLe+ v +L eN++L k+l ++ + SapurV1A.0110s0140.4.p 228 RESARRSRSRKQAHLTELETQVSQLRVENSSLLKRLTDTNQRYN 271 9*******************************988877776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-9 | 220 | 279 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-7 | 228 | 269 | No hit | No description |
PROSITE profile | PS50217 | 8.6 | 228 | 272 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-8 | 228 | 269 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.85E-7 | 228 | 269 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MDRVFSEEDN ITEHFWSPPP KDLSKMNRSE SEWAFERFLQ EASAATLEDN TSSNSSADKT 60 DVVQIKDHGN SNNNATSKCS FSNGTCATAA SSFGAPASFP VESDDYHAFL KSKLNLACAA 120 VALTRASFVK PLESHATAES GSQASNTSHL RSHAPSKGAG YNLSRSQDKD ANEPVGTPSL 180 PSMQRKSAVT VKPATSVSSR ELSEDDENEA ETELTENMHP TDAKRVRRES ARRSRSRKQA 240 HLTELETQVS QLRVENSSLL KRLTDTNQRY NESAVDNRVL KADVETLRAK VTHSTVLSLN 300 FRVYTKIST* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 231 | 238 | RRSRSRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0110s0140.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC237587 | 1e-150 | AC237587.1 Populus trichocarpa clone POP036-C05, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011038579.1 | 0.0 | PREDICTED: light-inducible protein CPRF2-like isoform X2 | ||||
Swissprot | Q99090 | 1e-86 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A2K1Y0Q8 | 1e-173 | A0A2K1Y0Q8_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0013s03800.1 | 1e-143 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.3 | 3e-49 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0110s0140.4.p |
Publications ? help Back to Top | |||
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