PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0110s0140.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 428aa    MW: 46737.4 Da    PI: 6.8481
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0110s0140.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.9e-15222276357
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                             + kr rr+ +NRe+ArrsR RK+a + eLe+ v +L  eN++L k+l   ++ + 
  SapurV1A.0110s0140.1.p 222 DAKRVRRMLSNRESARRSRSRKQAHLTELETQVSQLRVENSSLLKRLTDTNQRYN 276
                             579****************************************988877776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-18220284IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-11221273No hitNo description
PROSITE profilePS5021711.185222277IPR004827Basic-leucine zipper domain
PfamPF001709.4E-13223274IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-11224273No hitNo description
PfamPF124981.4E-40291413IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MDRVFSEEDN ITEHFWSPPP KDLSKMNRSE SEWAFERFLQ EASAATLEDN TSSNSSADKT  60
DVVQIKDHGN SNNNATSKCS FSNGTCATAA SSFGAPASFP VESDDYHAFL KSKLNLACAA  120
VALTRASFVK PLESHATAES GSQASNTSHL RSHAPSKGAG YNLSRSQDKD ANEPVGTPSL  180
PSMQRKSAVT VKPATSVSSR ELSEDDENEA ETELTENMHP TDAKRVRRML SNRESARRSR  240
SRKQAHLTEL ETQVSQLRVE NSSLLKRLTD TNQRYNESAV DNRVLKADVE TLRAKVKMAE  300
EKVKRFTGLN TMFHGMPDIS TMSMLSFDGS PPETSADAAV PVQDEPNHHF YQAPNNPITT  360
HDSRPRGSNN VFADISSVEN VQPNSVSGNK LGRSPSLQRV ASLEHLQKRI RGATTPCGPQ  420
SNGEQAK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236243RRSRSRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0110s0140.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2375871e-150AC237587.1 Populus trichocarpa clone POP036-C05, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011038579.10.0PREDICTED: light-inducible protein CPRF2-like isoform X2
SwissprotQ990901e-131CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2K1Y0Q80.0A0A2K1Y0Q8_POPTR; Uncharacterized protein
STRINGPOPTR_0013s03800.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-75bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]