PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0083s0430.2.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 326aa MW: 36469.2 Da PI: 6.5725

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0083s0430.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.3	2.5e-11	203	248	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ SapurV1A.0083s0430.2.p 203 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 248 899**********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.1E-14	199	263	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	201	253	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.7E-10	203	247	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.74E-12	203	257	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.2E-12	203	254	No hit	No description
CDD	cd14703	4.17E-23	204	254	No hit	No description
PROSITE pattern	PS00036	0	206	221	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MAQLPPKIPT VTQNWPSFSH QTVSNYFSTA AATMENHQPC WVDEFLDFTS TRRGAHRRSI 60 SDSITFIETT NMPSLVEDQC HDNNSSSCNN NNSSSNALIP ANLGFDKLDD DQLMSMFSHD 120 MSLSLPPSSS NPSTPSDQNS KNDEKPSMPA DQHRQQQEEN TEQKPAAVAK TEPGEVESSC 180 KQESHQPPPP TSSNNGDSIN DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV 240 SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQVYHHQN 300 LKKMNSSSHA SEQSPNHEAI QCSEN*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0083s0430.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC217644	0.0	AC217644.1 Populus trichocarpa clone POP037-C20, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024460733.1	0.0	basic leucine zipper 61 isoform X2
Swissprot	Q9M2K4	1e-101	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A2K2C9Y2	0.0	A0A2K2C9Y2_POPTR; Uncharacterized protein
STRING	POPTR_0001s38320.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	7e-97	bZIP family protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0083s0430.2.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]