PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0083s0130.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 264aa MW: 29101.9 Da PI: 10.4681 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.4 | 4.2e-10 | 195 | 238 | 4 | 48 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +k + r++kNRe+A rsR+RK+a ++ + + eL++eN+ Lk + SapurV1A.0083s0130.1.p 195 DKIQHRMIKNRESAARSRARKQAVEAQQQVENTELKKENDLLK-R 238 7899***********************************7554.4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0042 | 192 | 258 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.2E-9 | 194 | 238 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-6 | 194 | 239 | No hit | No description |
CDD | cd14707 | 3.35E-16 | 196 | 242 | No hit | No description |
Pfam | PF07716 | 4.8E-8 | 197 | 237 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 200 | 214 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence Send to blast |
MFPLPPSRED ELKASDFTAL SLSSDIQASQ QSYIPSQVAN KLQSAGFPCT RNSAGPMKVK 60 RKRCLDGAEL TIGIGSSSNL FKMQGVDHPT EPVSCVSLGG DYSHKQPAPT AAVSGFVKTS 120 EKRVFDGASP YHHQFVQGVR GGNANKESDD RRYVNDPNRA CLYQQYGRGI SCENDGKMNT 180 HPRARKAPGK SSFSDKIQHR MIKNRESAAR SRARKQAVEA QQQVENTELK KENDLLKRVF 240 LLAILRTKRM KLPALSRSFS APF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0083s0130.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B9GG08 | 1e-145 | B9GG08_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s38020.1 | 1e-146 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18822 | 6 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-10 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0083s0130.1.p |