PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0079s0410.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 325aa    MW: 35062.4 Da    PI: 8.3652
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0079s0410.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.8e-31159214156
                 G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                             k+r++W++eLH+ F++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  SapurV1A.0079s0410.2.p 159 KQRRCWSTELHRTFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 214
                             79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.581156216IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.4E-28156217IPR009057Homeodomain-like
SuperFamilySSF466892.35E-18157217IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-26159214IPR006447Myb domain, plants
PfamPF002497.4E-7161212IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0055062Biological Processphosphate ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MHGESDFSEQ TSSGGPLLEE FIPIKRTRSY DGNDDYQEQH SQNNSERNKT SISSSSNDHN  60
KKSDWLRSVQ LWNLFPDPPQ KQDLPRKAAV TEVKRNGAGC AFQPFHREKS AGKTSNQAIA  120
KAPTSVPASK TCSTAVVASG GLDGGSNKKE DQDGGNQRKQ RRCWSTELHR TFLHALQQLG  180
GSHAATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRPSP TIHNNSNQQA PQIVVVGGIW  240
VPPPEYAAVA ATAASTETSP FSAANGINAP IAAAATTFPQ KPHHVQSETL QSEGRDGHCE  300
GGAHSDDSPA TSSSTHTTTT SPVF*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00218DAPTransfer from AT1G68670Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0079s0410.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024462049.11e-174transcription factor HHO2
SwissprotQ8VZS32e-65HHO2_ARATH; Transcription factor HHO2
TrEMBLA0A2I4KKV81e-172A0A2I4KKV8_POPTR; G2-like family protein
STRINGPOPTR_0008s11630.11e-168(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.11e-55G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]
  2. Sun X, et al.
    The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides.
    J. Exp. Bot., 2018. 69(7): p. 1749-1764
    [PMID:29385617]