PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0079s0330.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 450aa MW: 49697.6 Da PI: 6.5111 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.2 | 2.4e-10 | 162 | 204 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k rr+++NReAAr+sR+RKka++++Le+ L++ ++L+ SapurV1A.0079s0330.1.p 162 RKTLRRLAQNREAARKSRLRKKAYVQQLENSRHRLTQLEQELQ 204 6889*************************99888887776654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-7 | 158 | 206 | No hit | No description |
SMART | SM00338 | 5.2E-8 | 159 | 230 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.415 | 161 | 205 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.3E-7 | 162 | 204 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 2.19E-23 | 163 | 215 | No hit | No description |
SuperFamily | SSF57959 | 4.9E-7 | 163 | 207 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 166 | 181 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-32 | 248 | 321 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence Send to blast |
MYCHSSFLLR GEDISSRNQT RFADLGELHQ PAPVFPHDDA VDLSSSSMFS LKSGNATAVS 60 HNLSYATALN TSIVPVEIAT TGAGCLDTGQ YMYQKGTGFG SSLGNGQSIE TWGDSGMAEN 120 SQQTDTSTDV DADDKNQLYG VQHGTAVVVE SVDQSKGKTG DRKTLRRLAQ NREAARKSRL 180 RKKAYVQQLE NSRHRLTQLE QELQRARQQG FFIASGFSGD HGHSITGNEA FAFDLDYSRW 240 LDEHHRLIND LRTAMNSHMS DDELRLLVDG VMAHYDEIFR LKSNGAKADV FHMLSGMWKT 300 PAERCFMWLG GFRSSELLKI LGNHLEPLTD QQLMGICNLQ QSSQQAEDAL SQGMEALQQS 360 LVDTLSSTSL GPAGSGNVAD YMGQMAIAMG KLATLENFLH QADLLRQQTL QQMHRILTTR 420 QAARALLVVS DYTSRLRALS SLWLARPRD* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in the determination of floral organ number. Acts to determine floral organ patterning by establishing floral organ primordia in specific numbers and positions. Plays a role in regulating stem cell fate by directly controlling AG expression. Binds to the 5'-AAGAAT-3' cis-acting element found in AG promoter. Might represent a target for a post-translational modification by GRXC7/ROXY1. {ECO:0000269|PubMed:19395638, ECO:0000269|PubMed:19395639, ECO:0000269|PubMed:9990857}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0079s0330.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002311449.2 | 0.0 | transcription factor TGA2.2 isoform X1 | ||||
Swissprot | Q9SX27 | 1e-180 | PAN_ARATH; Transcription factor PERIANTHIA | ||||
TrEMBL | A0A1L6K4R4 | 0.0 | A0A1L6K4R4_POPTO; Erianthia family protein | ||||
STRING | POPTR_0008s11710.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6022 | 31 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-157 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0079s0330.1.p |