PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0072s0470.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family CAMTA
Protein Properties Length: 918aa    MW: 102879 Da    PI: 8.3078
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0072s0470.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.53.4e-55201363118
                    CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                             +e k+rwl+++ei++iL n++k++lt+e++  p  gs++L++rk +ryfrkDG+ w+kkk+gktvrE+hekLK g+v+vl+cyYah+
  SapurV1A.0072s0470.3.p  20 EEaKHRWLRPTEILEILRNYQKFKLTAEPPAIPAAGSMFLFDRKALRYFRKDGHRWRKKKEGKTVREAHEKLKAGSVDVLHCYYAHG 106
                             4559*********************************************************************************** PP

                    CG-1  89 eenptfqrrcywlLeeelekivlvhylevk 118
                             e+n++fqrrcyw+L+ +le+iv+vhy+evk
  SapurV1A.0072s0470.3.p 107 EDNENFQRRCYWMLDGQLEHIVFVHYREVK 136
                             ***************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.25215141IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038594.6E-4921134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.1E-7356445IPR013783Immunoglobulin-like fold
SuperFamilySSF812966.11E-17357443IPR014756Immunoglobulin E-set
PfamPF018338.8E-7357442IPR002909IPT domain
PfamPF127961.2E-6538621IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.97E-15548654IPR020683Ankyrin repeat-containing domain
CDDcd002045.18E-14548651No hitNo description
Gene3DG3DSA:1.25.40.202.6E-15551682IPR020683Ankyrin repeat-containing domain
SMARTSM002484500559588IPR002110Ankyrin repeat
PROSITE profilePS5029715.592559653IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0011592621IPR002110Ankyrin repeat
PROSITE profilePS500889.938592624IPR002110Ankyrin repeat
SMARTSM002483100631660IPR002110Ankyrin repeat
SuperFamilySSF525401.27E-8761817IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.45766788IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.627767796IPR000048IQ motif, EF-hand binding site
PfamPF006120.004768787IPR000048IQ motif, EF-hand binding site
SMARTSM000155.1E-4789811IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.633790814IPR000048IQ motif, EF-hand binding site
PfamPF006126.6E-5793811IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 918 aa     Download sequence    Send to blast
MAETRRYIPD HTLNIEQILE EAKHRWLRPT EILEILRNYQ KFKLTAEPPA IPAAGSMFLF  60
DRKALRYFRK DGHRWRKKKE GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRCYWML  120
DGQLEHIVFV HYREVKEGYK SGVSRLLEDS GFHTLPKNPP RSWFAGAKFD HGTKSSLLPE  180
VSSSGQSVFS LPGQNFFVDQ PGGAEFITRK LTDATLEGNA VSDTVVSANG LITDRTATPQ  240
NVIQELDFNL ISPQFHNLSG TQTVAASTAQ VENKAKDGGA NNIQSGELKK LDSFGRWMDK  300
EIGGDCNDSL MASDSGNYWS TLSAENEDKE VSSLSHHMQL DIDSLGPSLS QDQLFSIRDF  360
SPDWAYSGVD TKVLIIGTFL GSKKFSSETK WGCMFGEIEV SAEVLNDCVI RCQVPQHAPG  420
HVPFYVTCRN RLSCSEVREF EYRENPSEIA SLPGKNVQPE EILFQMRLAK LLYLGPGMKL  480
SNCSIKDCES CKKISTLFNL RNDSKKDMGK VQDNFMVALG HGIGFRDKLI ESLLRDRLCE  540
WLACKVHEGG KGPDVLDGEG QGVIHLAAGL GYEWAMDLIV AASGNPNFRD ARGRTALHWA  600
SYFGREETVI ALIRLDVDPT AVDDPTPAFP GGQSAADLAS CRGHKGISGY LAEAFLSRHL  660
SSLNIDQNEM DRDTATMAAE KETDIAAQVA SFSSKGELEL LSLKGSLAAV RKSARAVALI  720
HAAYRTSSFR QRQLAKSSDD ISEISLDLAA LGSLNMVQKR GHFEDYLHSA AVKIQQKYRG  780
WKGRKDFLKI RNRIVKIQAH VRGHQVRKQY KKVVWSVGIV EKAILRWRRK RTGLRGFQLE  840
KTIGDVKPES EKADEYDFLR ISRKQKFAGV ENALARVTSM VRYPEARDQY MRMVTKFENI  900
KMGDEGYGVS QQDESSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0072s0470.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024466827.10.0calmodulin-binding transcription activator 2 isoform X6
RefseqXP_024466828.10.0calmodulin-binding transcription activator 2 isoform X6
TrEMBLA0A2K1YUI60.0A0A2K1YUI6_POPTR; Uncharacterized protein
STRINGPOPTR_0010s16290.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-144signal responsive 1