PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0072s0470.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family CAMTA
Protein Properties Length: 999aa    MW: 111314 Da    PI: 8.0004
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0072s0470.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.33.9e-55201363118
                    CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                             +e k+rwl+++ei++iL n++k++lt+e++  p  gs++L++rk +ryfrkDG+ w+kkk+gktvrE+hekLK g+v+vl+cyYah+
  SapurV1A.0072s0470.2.p  20 EEaKHRWLRPTEILEILRNYQKFKLTAEPPAIPAAGSMFLFDRKALRYFRKDGHRWRKKKEGKTVREAHEKLKAGSVDVLHCYYAHG 106
                             4559*********************************************************************************** PP

                    CG-1  89 eenptfqrrcywlLeeelekivlvhylevk 118
                             e+n++fqrrcyw+L+ +le+iv+vhy+evk
  SapurV1A.0072s0470.2.p 107 EDNENFQRRCYWMLDGQLEHIVFVHYREVK 136
                             ***************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143780.25215141IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-7818136IPR005559CG-1 DNA-binding domain
PfamPF038595.1E-4921134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.5E-7437526IPR013783Immunoglobulin-like fold
PfamPF018339.8E-7438523IPR002909IPT domain
SuperFamilySSF812966.87E-17438524IPR014756Immunoglobulin E-set
PfamPF127961.3E-6619702IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484035.6E-15629735IPR020683Ankyrin repeat-containing domain
CDDcd002045.85E-14629732No hitNo description
Gene3DG3DSA:1.25.40.202.8E-15632763IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.592640734IPR020683Ankyrin repeat-containing domain
SMARTSM002484500640669IPR002110Ankyrin repeat
PROSITE profilePS500889.938673705IPR002110Ankyrin repeat
SMARTSM002480.0011673702IPR002110Ankyrin repeat
SMARTSM002483100712741IPR002110Ankyrin repeat
SuperFamilySSF525401.41E-8842898IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.45847869IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.627848877IPR000048IQ motif, EF-hand binding site
PfamPF006120.0044849868IPR000048IQ motif, EF-hand binding site
SMARTSM000155.1E-4870892IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.633871895IPR000048IQ motif, EF-hand binding site
PfamPF006127.2E-5874892IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 999 aa     Download sequence    Send to blast
MAETRRYIPD HTLNIEQILE EAKHRWLRPT EILEILRNYQ KFKLTAEPPA IPAAGSMFLF  60
DRKALRYFRK DGHRWRKKKE GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRCYWML  120
DGQLEHIVFV HYREVKEGYK SGVSRLLEDS GTQVENLQPS SVTSFAQAAS PASTVQTSYA  180
SSPNKIDWNG KALSSEFEDV DSRNGPGTSS LTQSIHGSMS HNSSVLVPRV EGFHTLPKNP  240
PRSWFAGAKF DHGTKSSLLP EVSSSGQSVF SLPGQNFFVD QPGGAEFITR KLTDATLEGN  300
AVSDTVVSAN GLITDRTATP QNVIQELDFN LISPQFHNLS GTQTVAASTA QVENKAKDGG  360
ANNIQSGELK KLDSFGRWMD KEIGGDCNDS LMASDSGNYW STLSAENEDK EVSSLSHHMQ  420
LDIDSLGPSL SQDQLFSIRD FSPDWAYSGV DTKVLIIGTF LGSKKFSSET KWGCMFGEIE  480
VSAEVLNDCV IRCQVPQHAP GHVPFYVTCR NRLSCSEVRE FEYRENPSEI ASLPGKNVQP  540
EEILFQMRLA KLLYLGPGMK LSNCSIKDCE SCKKISTLFN LRNDSKKDMG KVQDNFMVAL  600
GHGIGFRDKL IESLLRDRLC EWLACKVHEG GKGPDVLDGE GQGVIHLAAG LGYEWAMDLI  660
VAASGNPNFR DARGRTALHW ASYFGREETV IALIRLDVDP TAVDDPTPAF PGGQSAADLA  720
SCRGHKGISG YLAEAFLSRH LSSLNIDQNE MDRDTATMAA EKETDIAAQV ASFSSKGELE  780
LLSLKGSLAA VRKSARAVAL IHAAYRTSSF RQRQLAKSSD DISEISLDLA ALGSLNMVQK  840
RGHFEDYLHS AAVKIQQKYR GWKGRKDFLK IRNRIVKIQA HVRGHQVRKQ YKKVVWSVGI  900
VEKAILRWRR KRTGLRGFQL EKTIGDVKPE SEKADEYDFL RISRKQKFAG VENALARVTS  960
MVRYPEARDQ YMRMVTKFEN IKMGDEGYGV SQQDESSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0072s0470.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024466825.10.0calmodulin-binding transcription activator 3 isoform X4
TrEMBLA0A2K1YUI60.0A0A2K1YUI6_POPTR; Uncharacterized protein
STRINGPOPTR_0010s16290.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1