PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0046s0400.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 700aa    MW: 78419.3 Da    PI: 5.5172
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0046s0400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221411.2e-43732131136
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaag 83 
                             gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGw v +DGtt++   +gs+p   +++a+ 
  SapurV1A.0046s0400.2.p  73 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWDVLPDGTTFPsrsQGSRPVgGTSAAVT 159
                             6899*****************************************************************988889999973333333 PP

                  DUF822  84 ssas..aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136
                             ss+s  +s++++   ++ +s   ++ ve   ++++ + +p ps ++   ++  +s 
  SapurV1A.0046s0400.2.p 160 SSSShlVSQQTPPAsLRGVSPGYQTSVEYNTCRMRGVFMPNPSPYNLSANT--QSQ 213
                             33333488888887789999***********************99876554..344 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.1E-3875210IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.36E-182259696IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.805.5E-200260695IPR013781Glycoside hydrolase, catalytic domain
PfamPF013737.2E-107265682IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74296310IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74317335IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74339360IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060343351IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008421.0E-6422431IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.3E-74432454IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74505524IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74539555IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74556567IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-74574597IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.0E-6577587IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.3E-74614636IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.0E-6665679IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.0E-6680694IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    Send to blast
MATDIQKLIG TSEEDDDEEM DMDVKEEDNE ENGGKNTVAQ IMAGVSGGTT SNSSDNQFQH  60
QQQFQEQVTT PSGGARRSRP LEEKERTKLR ERHRRAITAR ILAGLRRHGN YNLRVRADIN  120
DVIAALAREA GWDVLPDGTT FPSRSQGSRP VGGTSAAVTS SSSHLVSQQT PPASLRGVSP  180
GYQTSVEYNT CRMRGVFMPN PSPYNLSANT QSQIPAVGEG GEQTESDLHI GGSMDTINDK  240
QIADIPPIPK LPERDFAATP FIPVYVMLPL GVINMKCELG DPDGLLKQLK VLKSANVDGI  300
MVDCWWGIVE AHTPQEYNWN GYSRLFQMVR ELKLKLQVVM SFHECGGNVG DDVCIPLPHW  360
VAEIGRNNPD IFFTDREGRR NSECLSWGID KERVLRGRTA VEVYFDYMRS FRAEFDEFFA  420
DGIISMVEVG LGPCGELRYP SFPVKHGWRY PGIGEFQCYD QYLLKSLKKT AEARGHPFWA  480
RGPDNAGFYN SQPPETGFFC EGGDYDGYYG RFFLNWYTRI LVDHGDRVLS LAKLAFEGIQ  540
IAVKLSGIHW WYKTASHAAE LTAGFYNPCN RDGYAAIAAM LKRHKAALNF SCSELWMVDQ  600
QVDFAEALAD PEGLVWQVLN AAWEVGIPIA SENALPCYDR VTYNKILDNA KPLNDPDGRH  660
FLSFTHHRLS PLLMDRQTFM EFERFVKRMH GEAAVDHQV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdr_A1e-15726169211444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0046s0400.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002302585.20.0beta-amylase 7 isoform X3
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A3N7EQQ60.0A0A3N7EQQ6_POPTR; Beta-amylase
STRINGPOPTR_0002s16070.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]