PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0043s0520.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | HB-other | ||||||||
Protein Properties | Length: 339aa MW: 38292.9 Da PI: 4.7346 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.9 | 4.1e-09 | 267 | 317 | 4 | 54 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 R ++++ e+Le+++++++ p+ +++ + + ++L+ ++V WF +Ra SapurV1A.0043s0520.1.p 267 RKRLKRVHAETLERVYRRTKRPTNTMISSIVHVTNLPRKRVVKWFEDKRAE 317 777888899****************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50071 | 9.491 | 261 | 321 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 2.17E-8 | 263 | 319 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 4.7E-4 | 263 | 325 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.5E-7 | 267 | 318 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 3.05E-6 | 267 | 316 | No hit | No description |
Pfam | PF00046 | 9.4E-7 | 267 | 317 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002229 | Biological Process | defense response to oomycetes | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009682 | Biological Process | induced systemic resistance | ||||
GO:0009787 | Biological Process | regulation of abscisic acid-activated signaling pathway | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:2000022 | Biological Process | regulation of jasmonic acid mediated signaling pathway | ||||
GO:2000071 | Biological Process | regulation of defense response by callose deposition | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MAFALSSSSA STAFQSLTSL HSSDRLHMRP SSLLLSRHFL ATSTLAFSRR RNHNSTVTSS 60 SKKKKKSVSK KEVREEDDID EDAFEALFGM LEEDLKSDDL SMGDGDDEDG DLSEKDLEKL 120 QRELEEALGV GGDDDDEVEM ISSVGYDVED DDGEDEEEEE RPEMIKNWQL RRLARVLKIG 180 RRKTGIKSLA AELCLDRAVV LDLLRDPPPN LVMMSAALPD EPAPSVVMPE TKPSDIVFEE 240 TTDENVVKSE SEMKLPVHVM QDSWFARKRL KRVHAETLER VYRRTKRPTN TMISSIVHVT 300 NLPRKRVVKW FEDKRAEEGV PDNRNPFQRS VPETVSSS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 48 | 65 | RRRNHNSTVTSSSKKKKK |
2 | 61 | 70 | KKKKKSVSKK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity). Homeodomain transcription factor that mediates jasmonic acid (JA)-mediated COI1-dependent and abscisic acid (ABA)-mediated PMR4-dependent resistance to infection by necrotrophic fungal pathogens (e.g. B.cinerea and P.cucumerina) and bacterial pathogens (e.g. P.syringae DC3000); this resistance involves at least callose deposition (PubMed:15923348, PubMed:20836879, PubMed:21564353). Required for the P.fluorescens WCS417r-triggered JA-dependent induced systemic resistance (ISR) against both P.syringae DC3000 and H.arabidopsidis (PubMed:20836879). Negative regulator of the ABA-dependent drought resistance (PubMed:19175769). {ECO:0000250|UniProtKB:Q70Z19, ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769, ECO:0000269|PubMed:20836879, ECO:0000269|PubMed:21564353}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0043s0520.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Constitutively expressed in healthy plants but repressed in response to infection by necrotrophic fungi (PubMed:15923348). Repressed by drought and abscisic acid (ABA) (PubMed:19175769). {ECO:0000269|PubMed:15923348, ECO:0000269|PubMed:19175769}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011039713.1 | 0.0 | PREDICTED: proline-, glutamic acid- and leucine-rich protein 1 | ||||
Swissprot | Q8H0V5 | 2e-67 | OCP3_ARATH; Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 | ||||
TrEMBL | A0A2K2A822 | 1e-180 | A0A2K2A822_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0006s26790.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10181 | 31 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 2e-55 | overexpressor of cationic peroxidase 3 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0043s0520.1.p |
Publications ? help Back to Top | |||
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