PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0042s0280.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 303aa    MW: 33864.9 Da    PI: 10.2287
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0042s0280.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.81.1e-13156213562
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                             k+ +r ++NR++A++sR++++++++  e+kvk+Le+e  aL  ++  +k + ++lk+e
  SapurV1A.0042s0280.1.p 156 KKLKRVISNRVSAQKSRLKRLQYLADIERKVKALEEEIAALSPQVALYKSHHQALKME 213
                             899*****************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-12149211No hitNo description
SMARTSM003381.5E-12152216IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.91154217IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-11156211No hitNo description
PfamPF001706.7E-12156214IPR004827Basic-leucine zipper domain
CDDcd147032.93E-17157208No hitNo description
PROSITE patternPS000360159174IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MHYGVLILDR FALLQDRKCF DIIEAMKKSS NPGLPPWPRR ALELASFSAA PQSILPLARS  60
SFQGLKKPYS MNSSVTKSPF NPSDTITIPS SSADSNNKES PNLSFPIDNK NSSTKDLATD  120
PAFPSSGDKP AVKTRAMITG VQTRAARAID PNMDPKKLKR VISNRVSAQK SRLKRLQYLA  180
DIERKVKALE EEIAALSPQV ALYKSHHQAL KMEQRMLSME MSARTSNKIL KDAEIEDNKA  240
EVSRLRQLHL TQQEVMWVGW ANGFNQQMAG NPNMFLLSLE RIAYMTSIQD DVVGKLDENW  300
VF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0042s0280.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2103421e-152AC210342.1 Populus trichocarpa clone POP091-B06, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB9HNC11e-127B9HNC1_POPTR; Uncharacterized protein
STRINGPOPTR_0009s07880.11e-127(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148181113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.11e-22bZIP family protein