PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0039s0030.2.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

CAMTA

Protein Properties

Length: 1091aa MW: 122350 Da PI: 5.7887

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0039s0030.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.6	7.9e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 ++ ++rwl++ ei++iL n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+ SapurV1A.0039s0030.2.p 20 VEAQHRWLRPAEICEILSNYQKFSIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHG 106 6779********************************************************************************* PP CG-1 89 eenptfqrrcywlLeeelekivlvhylevk 118 e+n++fqrr+ywlLee+l++ivlvhy+evk SapurV1A.0039s0030.2.p 107 EDNENFQRRSYWLLEEKLSHIVLVHYREVK 136 *************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	81.577	15	141	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	1.1E-76	18	136	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	7.6E-49	21	134	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	2.2E-5	509	597	IPR013783	Immunoglobulin-like fold
SuperFamily	SSF81296	2.8E-15	511	597	IPR014756	Immunoglobulin E-set
Pfam	PF01833	1.7E-6	511	596	IPR002909	IPT domain
SuperFamily	SSF48403	5.44E-16	687	803	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	2.49E-12	689	801	No hit	No description
Gene3D	G3DSA:1.25.40.20	7.1E-17	698	831	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	17.184	709	813	IPR020683	Ankyrin repeat-containing domain
Pfam	PF12796	2.1E-7	714	804	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50088	10.419	742	774	IPR002110	Ankyrin repeat
SMART	SM00248	3.5E-4	742	771	IPR002110	Ankyrin repeat
SMART	SM00248	3300	781	810	IPR002110	Ankyrin repeat
SMART	SM00015	2	915	937	IPR000048	IQ motif, EF-hand binding site
SuperFamily	SSF52540	1.54E-7	916	966	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Pfam	PF00612	0.0045	918	936	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	8.206	918	945	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	0.0039	938	960	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	9.597	939	963	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	2.2E-4	941	960	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1091 aa Download sequence Send to blast
MADTKHYPLG NQLDIQQILV EAQHRWLRPA EICEILSNYQ KFSIAPEPAH MPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL 120 EEKLSHIVLV HYREVKGTRT NFNRIKEYEE HIPFSQEIED TIPSSEMDTS VSSGFRPNGY 180 QVPTRTTDTT SMNSAQASEY EDAESVYNNQ ASSRFHSFLE VQKPAMERID TGSYVPYDHM 240 TFSSDYQGKS PVVPGMDLIS LAQVDKTKDT FGTESACQPQ KVNDLPSWED VFENCVRGIE 300 SVPFQTFLSQ VDTVGIIPKQ EDEILEKLLT NSSDKREDIG SHILDQEAWQ SMEDASSHPS 360 KRSMDQKLLL DSGYDLTARF PDQQLDSGDL ISTLEPFYHD SNLHIQNDIQ IQPADVDHVM 420 TLEGKSMYSS SVKHHILDGS RTEGLKKLDS FTRWMSKELG DVEPQVQSSY GAYLITTEGE 480 NGVDDSSNPS QGHLETYLPS SSPSQDQLFS IIDFSPNWAY AGTEIKVLIM GRFLKGREAA 540 EKCKWSIMFG EAEVPAEVIA DGVLRCNTPS HKAGRVPFYV TCSNTIACSE VCEFEYRLSH 600 TQDITYNYSD SVTEDLNMRF GKLLSLSSVS PSKYDSSTVD EIMSSKINSL LNEDNETWDQ 660 MLELTSEEGF SSEKVKELLV QKLLKEQLHV WLLQKATEGG KGPSVLDEGG QGVLHFAAAL 720 GYDWALEPTI VAGVSVNFRD VNGWTALHWA ASYGRERTVA FLINLGAAPG ALTDPTPKYP 780 TSRTPADLAS ANGHKGISGF LAESALSAHL SSLNLEKQAG EAAESSGTKV LQALPGCNKT 840 SVNDADLPSG QSLKDSLAAV CNATQAAARI HQVFRVQSFQ KKQLKEYGDD KSGMSHERAL 900 SLIAVKSQKA GQCDEPVHAA IRIQNKFRGW KGRKEFLIIR QRIVKIQAHV RGHQVRKNYR 960 KIIWSVGLLD KIILRWRRKR SGLRGFKSEA LTDGSSMQIV PSKDDDDDFL KEGRRQTEER 1020 SQIALARVKS MHQHPEAREQ YRRLRNVVAE IQEAKAVCDW ANNPEVMAEF GDLVDLGTLM 1080 DGDSFMPTNS *

Sequence ? help Back to Top

Protein Sequence Length: 1091 aa Download sequence Send to blast

MADTKHYPLG NQLDIQQILV EAQHRWLRPA EICEILSNYQ KFSIAPEPAH MPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL  120
EEKLSHIVLV HYREVKGTRT NFNRIKEYEE HIPFSQEIED TIPSSEMDTS VSSGFRPNGY  180
QVPTRTTDTT SMNSAQASEY EDAESVYNNQ ASSRFHSFLE VQKPAMERID TGSYVPYDHM  240
TFSSDYQGKS PVVPGMDLIS LAQVDKTKDT FGTESACQPQ KVNDLPSWED VFENCVRGIE  300
SVPFQTFLSQ VDTVGIIPKQ EDEILEKLLT NSSDKREDIG SHILDQEAWQ SMEDASSHPS  360
KRSMDQKLLL DSGYDLTARF PDQQLDSGDL ISTLEPFYHD SNLHIQNDIQ IQPADVDHVM  420
TLEGKSMYSS SVKHHILDGS RTEGLKKLDS FTRWMSKELG DVEPQVQSSY GAYLITTEGE  480
NGVDDSSNPS QGHLETYLPS SSPSQDQLFS IIDFSPNWAY AGTEIKVLIM GRFLKGREAA  540
EKCKWSIMFG EAEVPAEVIA DGVLRCNTPS HKAGRVPFYV TCSNTIACSE VCEFEYRLSH  600
TQDITYNYSD SVTEDLNMRF GKLLSLSSVS PSKYDSSTVD EIMSSKINSL LNEDNETWDQ  660
MLELTSEEGF SSEKVKELLV QKLLKEQLHV WLLQKATEGG KGPSVLDEGG QGVLHFAAAL  720
GYDWALEPTI VAGVSVNFRD VNGWTALHWA ASYGRERTVA FLINLGAAPG ALTDPTPKYP  780
TSRTPADLAS ANGHKGISGF LAESALSAHL SSLNLEKQAG EAAESSGTKV LQALPGCNKT  840
SVNDADLPSG QSLKDSLAAV CNATQAAARI HQVFRVQSFQ KKQLKEYGDD KSGMSHERAL  900
SLIAVKSQKA GQCDEPVHAA IRIQNKFRGW KGRKEFLIIR QRIVKIQAHV RGHQVRKNYR  960
KIIWSVGLLD KIILRWRRKR SGLRGFKSEA LTDGSSMQIV PSKDDDDDFL KEGRRQTEER  1020
SQIALARVKS MHQHPEAREQ YRRLRNVVAE IQEAKAVCDW ANNPEVMAEF GDLVDLGTLM  1080
DGDSFMPTNS *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:18298954, ECO:0000269\|PubMed:19122675, ECO:0000269\|PubMed:19270186, ECO:0000269\|PubMed:21900483, ECO:0000269\|PubMed:22345509, ECO:0000269\|PubMed:22371088, ECO:0000269\|PubMed:23072934, ECO:0000269\|PubMed:23581962, ECO:0000269\|PubMed:25039701, ECO:0000269\|PubMed:25157030, ECO:0000269\|PubMed:28351986, ECO:0000269\|PubMed:28407487, ECO:0000305\|PubMed:11925432}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0039s0030.2.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269\|PubMed:11162426, ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:22345509}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024461052.1	0.0	calmodulin-binding transcription activator 3 isoform X2
Swissprot	Q8GSA7	0.0	CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBL	A0A2K1ZRQ8	0.0	A0A2K1ZRQ8_POPTR; Uncharacterized protein
STRING	POPTR_0007s05410.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	signal responsive 1

Link Out ? help Back to Top
Phytozome	SapurV1A.0039s0030.2.p

Publications ? help Back to Top
Zhang L,Du L,Shen C,Yang Y,Poovaiah BW Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling. Plant J., 2014. 78(2): p. 269-81 [PMID:24528504] Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae. Front Plant Sci, 2016. 7: p. 177 [PMID:26973658] Benn G, et al. Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60 [PMID:27432993] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986] Lolle S, et al. Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles. Cell Host Microbe, 2017. 21(4): p. 518-529.e4 [PMID:28407487] Kim YS, et al. CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection. Plant Cell, 2017. 29(10): p. 2465-2477 [PMID:28982964] Jacob F, et al. A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytol., 2018. 217(4): p. 1667-1680 [PMID:29226970]