PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0039s0030.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

CAMTA

Protein Properties

Length: 1092aa MW: 122478 Da PI: 5.7887

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0039s0030.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.6	7.9e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 ++ ++rwl++ ei++iL n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+ SapurV1A.0039s0030.1.p 20 VEAQHRWLRPAEICEILSNYQKFSIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHG 106 6779********************************************************************************* PP CG-1 89 eenptfqrrcywlLeeelekivlvhylevk 118 e+n++fqrr+ywlLee+l++ivlvhy+evk SapurV1A.0039s0030.1.p 107 EDNENFQRRSYWLLEEKLSHIVLVHYREVK 136 *************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	80.484	15	141	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	1.1E-76	18	136	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	7.6E-49	21	134	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	2.2E-5	510	598	IPR013783	Immunoglobulin-like fold
Pfam	PF01833	1.7E-6	512	597	IPR002909	IPT domain
SuperFamily	SSF81296	2.96E-15	512	598	IPR014756	Immunoglobulin E-set
SuperFamily	SSF48403	5.44E-16	688	804	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	2.50E-12	690	802	No hit	No description
Gene3D	G3DSA:1.25.40.20	7.1E-17	699	832	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	17.184	710	814	IPR020683	Ankyrin repeat-containing domain
Pfam	PF12796	2.1E-7	715	805	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50088	10.419	743	775	IPR002110	Ankyrin repeat
SMART	SM00248	3.5E-4	743	772	IPR002110	Ankyrin repeat
SMART	SM00248	3300	782	811	IPR002110	Ankyrin repeat
SMART	SM00015	2	916	938	IPR000048	IQ motif, EF-hand binding site
SuperFamily	SSF52540	1.54E-7	917	967	IPR027417	P-loop containing nucleoside triphosphate hydrolase
PROSITE profile	PS50096	8.206	919	946	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.0045	919	937	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	0.0039	939	961	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	9.597	940	964	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	2.2E-4	942	961	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 1092 aa Download sequence Send to blast
MADTKHYPLG NQLDIQQILV EAQHRWLRPA EICEILSNYQ KFSIAPEPAH MPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL 120 EEKLSHIVLV HYREVKQGTR TNFNRIKEYE EHIPFSQEIE DTIPSSEMDT SVSSGFRPNG 180 YQVPTRTTDT TSMNSAQASE YEDAESVYNN QASSRFHSFL EVQKPAMERI DTGSYVPYDH 240 MTFSSDYQGK SPVVPGMDLI SLAQVDKTKD TFGTESACQP QKVNDLPSWE DVFENCVRGI 300 ESVPFQTFLS QVDTVGIIPK QEDEILEKLL TNSSDKREDI GSHILDQEAW QSMEDASSHP 360 SKRSMDQKLL LDSGYDLTAR FPDQQLDSGD LISTLEPFYH DSNLHIQNDI QIQPADVDHV 420 MTLEGKSMYS SSVKHHILDG SRTEGLKKLD SFTRWMSKEL GDVEPQVQSS YGAYLITTEG 480 ENGVDDSSNP SQGHLETYLP SSSPSQDQLF SIIDFSPNWA YAGTEIKVLI MGRFLKGREA 540 AEKCKWSIMF GEAEVPAEVI ADGVLRCNTP SHKAGRVPFY VTCSNTIACS EVCEFEYRLS 600 HTQDITYNYS DSVTEDLNMR FGKLLSLSSV SPSKYDSSTV DEIMSSKINS LLNEDNETWD 660 QMLELTSEEG FSSEKVKELL VQKLLKEQLH VWLLQKATEG GKGPSVLDEG GQGVLHFAAA 720 LGYDWALEPT IVAGVSVNFR DVNGWTALHW AASYGRERTV AFLINLGAAP GALTDPTPKY 780 PTSRTPADLA SANGHKGISG FLAESALSAH LSSLNLEKQA GEAAESSGTK VLQALPGCNK 840 TSVNDADLPS GQSLKDSLAA VCNATQAAAR IHQVFRVQSF QKKQLKEYGD DKSGMSHERA 900 LSLIAVKSQK AGQCDEPVHA AIRIQNKFRG WKGRKEFLII RQRIVKIQAH VRGHQVRKNY 960 RKIIWSVGLL DKIILRWRRK RSGLRGFKSE ALTDGSSMQI VPSKDDDDDF LKEGRRQTEE 1020 RSQIALARVK SMHQHPEARE QYRRLRNVVA EIQEAKAVCD WANNPEVMAE FGDLVDLGTL 1080 MDGDSFMPTN S*

Sequence ? help Back to Top

Protein Sequence Length: 1092 aa Download sequence Send to blast

MADTKHYPLG NQLDIQQILV EAQHRWLRPA EICEILSNYQ KFSIAPEPAH MPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEDNE NFQRRSYWLL  120
EEKLSHIVLV HYREVKQGTR TNFNRIKEYE EHIPFSQEIE DTIPSSEMDT SVSSGFRPNG  180
YQVPTRTTDT TSMNSAQASE YEDAESVYNN QASSRFHSFL EVQKPAMERI DTGSYVPYDH  240
MTFSSDYQGK SPVVPGMDLI SLAQVDKTKD TFGTESACQP QKVNDLPSWE DVFENCVRGI  300
ESVPFQTFLS QVDTVGIIPK QEDEILEKLL TNSSDKREDI GSHILDQEAW QSMEDASSHP  360
SKRSMDQKLL LDSGYDLTAR FPDQQLDSGD LISTLEPFYH DSNLHIQNDI QIQPADVDHV  420
MTLEGKSMYS SSVKHHILDG SRTEGLKKLD SFTRWMSKEL GDVEPQVQSS YGAYLITTEG  480
ENGVDDSSNP SQGHLETYLP SSSPSQDQLF SIIDFSPNWA YAGTEIKVLI MGRFLKGREA  540
AEKCKWSIMF GEAEVPAEVI ADGVLRCNTP SHKAGRVPFY VTCSNTIACS EVCEFEYRLS  600
HTQDITYNYS DSVTEDLNMR FGKLLSLSSV SPSKYDSSTV DEIMSSKINS LLNEDNETWD  660
QMLELTSEEG FSSEKVKELL VQKLLKEQLH VWLLQKATEG GKGPSVLDEG GQGVLHFAAA  720
LGYDWALEPT IVAGVSVNFR DVNGWTALHW AASYGRERTV AFLINLGAAP GALTDPTPKY  780
PTSRTPADLA SANGHKGISG FLAESALSAH LSSLNLEKQA GEAAESSGTK VLQALPGCNK  840
TSVNDADLPS GQSLKDSLAA VCNATQAAAR IHQVFRVQSF QKKQLKEYGD DKSGMSHERA  900
LSLIAVKSQK AGQCDEPVHA AIRIQNKFRG WKGRKEFLII RQRIVKIQAH VRGHQVRKNY  960
RKIIWSVGLL DKIILRWRRK RSGLRGFKSE ALTDGSSMQI VPSKDDDDDF LKEGRRQTEE  1020
RSQIALARVK SMHQHPEARE QYRRLRNVVA EIQEAKAVCD WANNPEVMAE FGDLVDLGTL  1080
MDGDSFMPTN S*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:18298954, ECO:0000269\|PubMed:19122675, ECO:0000269\|PubMed:19270186, ECO:0000269\|PubMed:21900483, ECO:0000269\|PubMed:22345509, ECO:0000269\|PubMed:22371088, ECO:0000269\|PubMed:23072934, ECO:0000269\|PubMed:23581962, ECO:0000269\|PubMed:25039701, ECO:0000269\|PubMed:25157030, ECO:0000269\|PubMed:28351986, ECO:0000269\|PubMed:28407487, ECO:0000305\|PubMed:11925432}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0039s0030.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269\|PubMed:11162426, ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:22345509}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024461051.1	0.0	calmodulin-binding transcription activator 3 isoform X1
Swissprot	Q8GSA7	0.0	CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBL	B9HFG2	0.0	B9HFG2_POPTR; Uncharacterized protein
STRING	POPTR_0007s05410.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8284	27	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	signal responsive 1

Link Out ? help Back to Top
Phytozome	SapurV1A.0039s0030.1.p

Publications ? help Back to Top
Zhang L,Du L,Shen C,Yang Y,Poovaiah BW Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling. Plant J., 2014. 78(2): p. 269-81 [PMID:24528504] Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae. Front Plant Sci, 2016. 7: p. 177 [PMID:26973658] Benn G, et al. Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60 [PMID:27432993] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986] Lolle S, et al. Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles. Cell Host Microbe, 2017. 21(4): p. 518-529.e4 [PMID:28407487] Kim YS, et al. CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection. Plant Cell, 2017. 29(10): p. 2465-2477 [PMID:28982964] Jacob F, et al. A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytol., 2018. 217(4): p. 1667-1680 [PMID:29226970]