PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0036s0930.3.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 321aa MW: 36182.9 Da PI: 6.1683

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0036s0930.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.6	3.5e-15	250	297	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L+k+ el+ SapurV1A.0036s0930.3.p 250 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENERLRKQ-RELE 297 79****************************************64.4555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.2E-14	241	295	No hit	No description
SMART	SM00338	1.8E-13	246	318	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.645	248	293	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.19E-11	250	295	No hit	No description
Pfam	PF00170	6.5E-12	250	293	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.21E-24	250	304	No hit	No description
PROSITE pattern	PS00036	0	253	268	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MGMQTMGSQG DGSSHHKQSQ FQSLARQNSM YNLTLDEVQN QLGDLGKPLS SMNLDEFLKN 60 VWTVEATQTT GLEVEGTPFA NQTALQCQAS LSLTSDLSKK TVDEVWKDIQ QSKHDEEMKS 120 KERQPTLGEV TLEDFLVKAG VVAEAYVDKK DGSVVLVDTN AAQQFQQQSQ WVQYPPQPQY 180 QHPQQSMMGV YMPGQPMPQP LCMGAGSMMD VSCPENQVPL PPSLMGTLSD TQMPARKRGV 240 PDMIEKTVER RQKRMIKNRE SAARSRARKQ AYTNELENKI SRLEEENERL RKQRELENML 300 PCTPLPEPKY QLRRTTSAPF *

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0036s0930.3.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF145279	0.0	EF145279.1 Populus trichocarpa clone WS01122_M06 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002311917.2	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_024462231.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-93	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	B9HK82	0.0	B9HK82_POPTR; Uncharacterized protein
STRING	POPTR_0008s01130.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	3e-83	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	SapurV1A.0036s0930.3.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]