PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0032s0720.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 503aa MW: 55967.9 Da PI: 6.0379

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0032s0720.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	428.7	8.9e-132	220	436	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaatak SapurV1A.0032s0720.1.p 220 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATAK 306 7****************9648************************************************************ PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei SapurV1A.0032s0720.1.p 307 SPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEI 393 *********************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.1.p 394 NNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 436 ***************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence Send to blast
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRMVDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQVIIE YHIPFIVHGG SLGSFSTDIC RLLQLCEEED DATSALAAPK 120 LEPNDQRLQV GNNVVFQEGY GVNHGQQEHV FPFVDQCKAS PSGDRSMVIN SVEGVAQLEY 180 HDFDLPQNSE QNFYTGFNGM DLGEDATHLV SSYLPSMFLP PSAFLGPKCA LWDCSRPAQG 240 GLDWFQDYCS SFHHAVALNE GPPGLSPILR PGGIGLKDGL LFSSLSAKVE GKDVGIPECE 300 GAATAKSPWN APELFDLSVL KGETIREWLF FDKPRRAFES GNRKQRSLPD YTGRGWHESR 360 KQVMNEFGGL KRSYYMDPQP LNNFEWHLYE YEINNCDACA LYRLELKAVD GKKSAKGKVA 420 NESVADLQKQ MGRLTAEFPA EHKRAVKGRT KVNSKASVGN VYSGSTRVAP PTNEAYDNGS 480 GPHYDYLTEN LGDYYLTQFK KP*

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence Send to blast

MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFLDLQFARK ESRMVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQQVIIE YHIPFIVHGG SLGSFSTDIC RLLQLCEEED DATSALAAPK  120
LEPNDQRLQV GNNVVFQEGY GVNHGQQEHV FPFVDQCKAS PSGDRSMVIN SVEGVAQLEY  180
HDFDLPQNSE QNFYTGFNGM DLGEDATHLV SSYLPSMFLP PSAFLGPKCA LWDCSRPAQG  240
GLDWFQDYCS SFHHAVALNE GPPGLSPILR PGGIGLKDGL LFSSLSAKVE GKDVGIPECE  300
GAATAKSPWN APELFDLSVL KGETIREWLF FDKPRRAFES GNRKQRSLPD YTGRGWHESR  360
KQVMNEFGGL KRSYYMDPQP LNNFEWHLYE YEINNCDACA LYRLELKAVD GKKSAKGKVA  420
NESVADLQKQ MGRLTAEFPA EHKRAVKGRT KVNSKASVGN VYSGSTRVAP PTNEAYDNGS  480
GPHYDYLTEN LGDYYLTQFK KP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0032s0720.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006377435.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024437335.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0032s0720.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]