PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0031s0130.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | WRKY | ||||||||
Protein Properties | Length: 446aa MW: 48767.9 Da PI: 7.0592 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 95 | 152 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k SapurV1A.0031s0130.5.p 95 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSN-DGQITEIVYKGTHDHPK 152 8****************************************.***************85 PP | |||||||
2 | WRKY | 104.8 | 4.6e-33 | 260 | 318 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK v+g+++prsYY+Ct agCpv+k ver+++dpk+v +tYeg+Hnhe SapurV1A.0031s0130.5.p 260 LDDGYRWRKYGQKLVRGNPNPRSYYKCTNAGCPVRKLVERASHDPKAVMTTYEGKHNHE 318 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 22.848 | 89 | 153 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-25 | 93 | 153 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.4E-27 | 93 | 153 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.9E-34 | 94 | 152 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.8E-25 | 95 | 151 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.9E-36 | 245 | 320 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.45E-29 | 252 | 320 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 36.977 | 255 | 320 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.3E-38 | 260 | 319 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.1E-26 | 261 | 318 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 446 aa Download sequence Send to blast |
MVSADMNHQQ SAQCVEVQRQ LQSQSFASSP SVKGEMAVCT NELTLSPPLH MITSGSSAPA 60 EVDSDELNQM GLSSSGLRAS QSDHKTGSAP TMSSDDGYNW RKYGQKHVKG SEFPRSYYKC 120 THPNCEVKKL FERSNDGQIT EIVYKGTHDH PKPQPSRRYA SGSVLFTQEE RFDKFSSLPS 180 QDDKSPRVCG QVSHAIEPDS APELSPGTTN DDTGEGAEDD EDPFLKRRRL DAGGFDVTPV 240 IKPIREPRVV VQTLSEIDIL DDGYRWRKYG QKLVRGNPNP RSYYKCTNAG CPVRKLVERA 300 SHDPKAVMTT YEGKHNHEVP TAKTNSHDTA GPSAGNGTSR TRPDKNETIS LHLGVGISST 360 SENWSGDQRQ ALHAELVGIE NQSSGSSFRI VRASPIAAYY GVLNGGMNQY GSRQIPSEGR 420 RIEIPPLSHS SYPYPQNVGS LLSGP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-34 | 95 | 320 | 8 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 2e-34 | 95 | 320 | 8 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 225 | 229 | KRRRL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0031s0130.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC208047 | 0.0 | AC208047.1 Populus trichocarpa clone JGIACSB05-H10, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011011134.1 | 0.0 | PREDICTED: probable WRKY transcription factor 20 isoform X1 | ||||
Swissprot | Q93WV0 | 1e-155 | WRK20_ARATH; Probable WRKY transcription factor 20 | ||||
TrEMBL | A0A2K1YHI5 | 0.0 | A0A2K1YHI5_POPTR; Uncharacterized protein | ||||
TrEMBL | A0A3N7FR29 | 0.0 | A0A3N7FR29_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s37260.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26640.1 | 1e-150 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0031s0130.5.p |