PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0025s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 224aa MW: 24284.1 Da PI: 10.1678 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.4 | 4e-15 | 153 | 200 | 4 | 51 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++r r++kNRe+A rsR+RK+a++ eLe kv+ L +eN +L+k+ e+ SapurV1A.0025s0010.1.p 153 DRRHERMIKNRESAARSRARKQAYTTELELKVAMLGEENAKLRKQQER 200 57899**************************************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-11 | 150 | 214 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.507 | 152 | 201 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.6E-14 | 153 | 199 | No hit | No description |
CDD | cd14707 | 1.83E-25 | 154 | 208 | No hit | No description |
SuperFamily | SSF57959 | 9.38E-11 | 154 | 200 | No hit | No description |
Pfam | PF00170 | 6.7E-13 | 154 | 199 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 158 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MLSLLAADQN INKNNMNTKK VSSDSPSKSP NTCSSPSTLS SPSPIPNQLV IGNSMEEVWN 60 DINLASLHEQ PSNYTGSNAN ANTNDHVLHG MTFQDLLATS SNKDTPTRVA SKEPSSGGGN 120 NLLKNSLGPS PATMMNLNYG KRPHENGDVS GGDRRHERMI KNRESAARSR ARKQAYTTEL 180 ELKVAMLGEE NAKLRKQQER FLAAAPAQPP KKHTLYRTST APF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0025s0010.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC690137 | 5e-81 | KC690137.1 Populus tremula x Populus alba FD (POPTR_0005s26480.1) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024450386.1 | 1e-117 | protein FD isoform X1 | ||||
Swissprot | Q84JK2 | 2e-33 | FD_ARATH; Protein FD | ||||
TrEMBL | B9GQR4 | 5e-77 | B9GQR4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0002s02000.1 | 8e-78 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-29 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0025s0010.1.p |