PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0018s0520.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | G2-like | ||||||||
Protein Properties | Length: 229aa MW: 24697.1 Da PI: 5.2749 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30.5 | 8.2e-10 | 173 | 197 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r+rWt LHe+Fve+v++LGG+ SapurV1A.0018s0520.1.p 173 KKRIRWTRGLHEKFVECVNSLGGIA 197 78*********************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.6E-7 | 171 | 201 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MGGVSPWQDP EPATSTDITP SQFDQLAAAF CTSECLLDFQ LDDDYEIATF PSSSQVPVPN 60 DAKMASCQSS RGNIFDESSW QTSLGPYLYS NQHHKYCGKI QKYLSTIDSG GSTSLSLERV 120 QVLGDNATLI GGQLQPPSDR QNDPELESST RHLGDGYSTC SGSGSSGPIF SSKKRIRWTR 180 GLHEKFVECV NSLGGIASKS KTKGHTEDDG NKRVDHHTGQ KSLAEISI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0018s0520.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024443216.1 | 1e-111 | uncharacterized protein LOC18109673 isoform X4 | ||||
TrEMBL | A0A2K1XAS1 | 1e-113 | A0A2K1XAS1_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0453s00230.1 | 6e-96 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF40360 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 7e-08 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0018s0520.1.p |