PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0017s0490.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 337aa    MW: 36744 Da    PI: 8.2932
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0017s0490.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.4e-31131184255
                 G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                             pr+rWt++LH++F++av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  SapurV1A.0017s0490.1.p 131 PRMRWTTTLHAHFIHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 184
                             9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.5E-28129185IPR009057Homeodomain-like
SuperFamilySSF466894.66E-15129185IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-23131184IPR006447Myb domain, plants
PfamPF002491.6E-7132183IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MRAVSLFPDL SLQISPPAVL AAKETGDDGR LAGKALCRDR SSTADSGSSG SDLSHENGFL  60
NQDRITYNPG PSQPPLSLGF DMTDLSSPSL QLPRNLDHQY NHDHHHPQIY GHDFKTSARI  120
IRGVKRSARA PRMRWTTTLH AHFIHAVQLL GGHERATPKS VLELMNVKDL TLAHVKSHLQ  180
MYRTVKSTDK GSVSGQTDQR ATILEVDAAG LSGEKTGASN PSDSLNNPPP PPPPPPLSSI  240
QKNQRNSRSL SMAGDEKNRS SLYSLTYSDF TAHDQSKEVG QKATLNMAAN LKERLDSSSL  300
SSSDTLLNLE FTLGRPSWHL DYAESSNDHQ LTLLKC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-17132186357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-17132186357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-17132186357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-17132186357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-17132186458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0017s0490.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024450888.11e-161probable transcription factor KAN4 isoform X1
TrEMBLA0A2K2BI441e-159A0A2K2BI44_POPTR; Uncharacterized protein
STRINGcassava4.1_011255m1e-123(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44633358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.13e-64G2-like family protein