PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0014s0680.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 473aa    MW: 52171.6 Da    PI: 8.0146
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0014s0680.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.81.3e-29104161260
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                             +Dgy+WrKYGqK vkg+ef rsYY+Ct+++C+vkk++e+s+ d+k+v+i+Y geH+h+k
  SapurV1A.0014s0680.1.p 104 EDGYRWRKYGQKLVKGNEFIRSYYKCTHPSCQVKKQLECSH-DGKLVDIVYIGEHEHPK 161
                             7***************************************9.***************85 PP
2WRKY100.11.4e-31270328159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             ++Dgy+WrKYGqK vkgs++prsYYrC+s++Cpvkk+ver+ +dpk v++ Y g+H+h+
  SapurV1A.0014s0680.1.p 270 VNDGYRWRKYGQKLVKGSPNPRSYYRCSSPRCPVKKHVERAYNDPKSVITSYVGQHDHD 328
                             58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-2698162IPR003657WRKY domain
PROSITE profilePS5081123.22798162IPR003657WRKY domain
SuperFamilySSF1182909.81E-2499162IPR003657WRKY domain
SMARTSM007742.7E-33103161IPR003657WRKY domain
PfamPF031067.1E-23104160IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.2E-32256330IPR003657WRKY domain
SuperFamilySSF1182901.26E-27264330IPR003657WRKY domain
PROSITE profilePS5081132.787265330IPR003657WRKY domain
SMARTSM007744.3E-34270329IPR003657WRKY domain
PfamPF031066.5E-24271327IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MVLSKEVSPK ELQKRQTPDG GTDTTQQTCG SGGDASQQKG IPPSNTPGKP LENTGGRILQ  60
LDKEGSVSSL AARKLSHSPG SDLHSLQSSQ EGWSPSITRE KVSEDGYRWR KYGQKLVKGN  120
EFIRSYYKCT HPSCQVKKQL ECSHDGKLVD IVYIGEHEHP KPQLNLPQEV GCVLTLVEEK  180
PDNLLLTGIE ESQAPNPIES TTTSQISTVT SGEDVKRVLS EPNRIRDEVD DYQRSKQRKK  240
GSCNDDSTPV DKPTSEPRLV IKKKYEVDTV NDGYRWRKYG QKLVKGSPNP RSYYRCSSPR  300
CPVKKHVERA YNDPKSVITS YVGQHDHDMP PSRTVTHNTT GFNTATTTQD GESGAKSGES  360
DAISLDKVAY NSSDSNIKSE EKMSSELRNK LKESISGHES ESREQQNGKS SATKAKDIVF  420
NANPVSAGRL TEQNDDESRI ESKEKSAVRA TTPGPKSNPN EQHMLNSEPV QS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-31102331275WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0014s0680.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006375555.10.0WRKY transcription factor 1
RefseqXP_006375556.10.0WRKY transcription factor 1
RefseqXP_024440287.10.0WRKY transcription factor 1
TrEMBLC9DHZ10.0C9DHZ1_9ROSI; WRKY transcription factor 2
STRINGPOPTR_0014s16220.20.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.24e-79zinc-dependent activator protein-1