PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0013s1020.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | WRKY | ||||||||
Protein Properties | Length: 135aa MW: 14769.7 Da PI: 10.0733 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 41.1 | 3.6e-13 | 110 | 133 | 1 | 24 |
---SS-EEEEEEE--TT-SS-EEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsY 24 ldDgy+WrKYGqK vk+s++prsY SapurV1A.0013s1020.2.p 110 LDDGYRWRKYGQKAVKNSKYPRSY 133 59********************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-14 | 96 | 133 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.06E-11 | 103 | 133 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.573 | 105 | 134 | IPR003657 | WRKY domain |
SMART | SM00774 | 0.0018 | 110 | 134 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.8E-9 | 111 | 133 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MEGQGAPPPP PPPLPQFPSQ NSPYLFTPSL LLSSSLHPSI IEPQGLPDID WVGLLSGQSG 60 LGQNRPIMDN ASMVAENGAE EEKGKKKGGR MKKATRPRFA FQTRSADDIL DDGYRWRKYG 120 QKAVKNSKYP RSYT* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00539 | DAP | Transfer from AT5G41570 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0013s1020.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | GQ377439 | 2e-66 | GQ377439.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 19 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002320160.2 | 9e-70 | probable WRKY transcription factor 43 | ||||
TrEMBL | B9I8Q5 | 2e-68 | B9I8Q5_POPTR; Uncharacterized protein | ||||
STRING | XP_002511926.1 | 2e-55 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 1e-17 | WRKY DNA-binding protein 75 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0013s1020.2.p |