PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0013s0770.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 374aa    MW: 39844.4 Da    PI: 8.3935
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0013s0770.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.21.3e-21259321163
                             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L +eN+aLk+e+++ +++++kl+ e+
  SapurV1A.0013s0770.2.p 259 ERELKRERRKQSNRESARRSRLRKQAEAEELACKVETLNTENMALKSEIDQFTEKSQKLRLEN 321
                             89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.7E-36193IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.3E-28126240No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-17253318No hitNo description
SMARTSM003381.3E-20259323IPR004827Basic-leucine zipper domain
PfamPF001704.9E-20259321IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.691261324IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10262318No hitNo description
CDDcd147023.36E-19264313No hitNo description
PROSITE patternPS000360266281IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MGNNEEGKSS ASDKSSPAQQ DQTNIHVYPD WAAMQAYYGS RVALPPYYNS AVASGHAPHP  60
YMWGPPQPMM APYGAPYAAI YSHGGVYAHP AVPIGSHPHG PGVLSSPAAN TPLSAETPTK  120
SSGNTDRGLM KKLKGFDGLA MSIGNGDAES AEGGSRLPQS METEGSSDGS DGNTARGKKR  180
SREGTPTVGG DKKIETNRGP LLGEVNPSTD KVLGAVVDPG MTTALELRNP SSVNVAKTNP  240
ATIPQPGVLL PSEGWVQNER ELKRERRKQS NRESARRSRL RKQAEAEELA CKVETLNTEN  300
MALKSEIDQF TEKSQKLRLE NAALMQEKLK NARLGPTQEM VLNNIDEQRN SNSGAKLHQL  360
LDASPRADAV AAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1275281RRSRLRK
2275282RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0013s0770.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2080945e-45AC208094.1 Populus trichocarpa clone JGIACSB09-L10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024441244.10.0common plant regulatory factor 1 isoform X3
SwissprotQ990891e-124CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A3N7FZK40.0A0A3N7FZK4_POPTR; Uncharacterized protein
STRINGPOPTR_0014s08990.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-110G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]