PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0009s1200.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 489aa    MW: 54012.4 Da    PI: 6.3657
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0009s1200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.6e-09203243545
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                             k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  SapurV1A.0009s1200.1.p 203 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQEL 243
                             7889************************9877777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.5E-7199262IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.427201245IPR004827Basic-leucine zipper domain
PfamPF001701.3E-6203243IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-7203246No hitNo description
CDDcd147081.59E-22203255No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-7204247No hitNo description
PROSITE patternPS000360206221IPR004827Basic-leucine zipper domain
PfamPF141447.4E-33285360IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MGSGTGAEDE KKAIGMPSFD PQLPISNAIS VGGSTVHPYC VTDFGVFLED NAIDLSAGTV  60
FNSAKESSRA TPSDCLHSGT FEKKQSTTSF NIKSSASQEE SHRLPLEKVQ QSNQVSIPIV  120
DTENWGETWR LPLEKVQQSN RVSIPSVNTE NWGEADMADA SPRTDISTDA DTDDKNQRYD  180
RGQSTALMAS DSSDRTKDKL DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLSQLE  240
QELQRARQQG IFISSSGDQA HSMSGNGAMA FDVEYARWLE EQNRQINELR SAVNSHAGDA  300
ELRIIIDGIM AHYDEVFKLK SNAAKADVFH LLSGMWKTPA ERCFLWLGGF RSSELLKLLM  360
NHLEPLTEQQ LVGIGNLQQS SQQAEDALSQ GMEALQQSLS ETLCSGSLGS SGSSGNVANY  420
MGQMAMAMGK LGTLEGFIRQ ADNLRQQTLQ QMHRILTTRQ SARALLAIHD YFSRLRALSS  480
LWLARPKE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0009s1200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002303938.30.0transcription factor TGA2
RefseqXP_024453579.10.0transcription factor TGA2
RefseqXP_024453580.10.0transcription factor TGA2
RefseqXP_024453581.10.0transcription factor TGA2
RefseqXP_024453582.10.0transcription factor TGA2
RefseqXP_024453583.10.0transcription factor TGA2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2K2B9N10.0A0A2K2B9N1_POPTR; Uncharacterized protein
STRINGPOPTR_0003s19410.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-167TGACG motif-binding factor 6